Megalobrama amblycephala (Wuchang bream): 125280292
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Entry
125280292 CDS
T08212
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00310
Lysine degradation
mamb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125280292 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125280292 (prdm16)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125280292 (prdm16)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
125280292 (prdm16)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125280292 (prdm16)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125280292 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
SET
zf-H2C2_5
zf-BED
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
Flavi_propep
DUF7128
Motif
Other DBs
NCBI-GeneID:
125280292
NCBI-ProteinID:
XP_048066686
LinkDB
All DBs
Position
LG12:33044373..33299199
Genome browser
AA seq
1247 aa
AA seq
DB search
MRSKARARKLAKNDSDAVDSMYDTEPNLVTGESAEEETEDSIMSPIAVGPTSPQPCNEDF
TPKEGSPYEVPVYIPDDIPIPADLELRESSVPGAGLGIWAKVKIRMGERFGPYNGLQSAT
VKETTYGWEQMLNDHETSSQDSCIKKVMDNMGSVKFCLDGSLEASGSWLKYVRTAPSHEE
HNLVMCHISEDQIYYKAIRDIEIGEELLVYMKDGVFPEGSMAPNLEDEQMYRCEHCDELF
TSKLELRRHQKYSCSSSNSIFDSLSEDFKQEREDSDEPVHECKDCEKIFPSEYSLGQHMI
VHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCDKMDVTPQDVNFPKVFTDP
SNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSVKPFICKSEQSCLSLRYNY
QCPKTSRLAPPQDCDSCCFIGEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTT
SSLNKHRRFCEGKNHYNPGGMFTPGIPMTSSPILGKSKSHPGLNHGGLGFGDYFSSRAHH
AGLPFSPAPPAFPAISHGFPGIFPPSLYPRPPLLPPSSLLKSPLSNSQDGKLPPLDAPTL
SVVSSMHNSNGNVGSGLSSQSEENRESKLDLSFSDNKNKVKMNDMSDGSDLEDVNTSSGT
DLDTTTGTVSGSDLESEAESEREKSRRKPVQESKQDEVSSSSVSVSSSGNLPCERPFLSS
QHSFFPPPEEQALPPSGATTDSIKAIASIAEKYFGPGFMGLQEKKMGSLNYHSMFPFQFL
PNFPHSLYPFTDRALNPGMFFKPEPKSPREHIQKLPTATGADSPFDLTTKPKEVKPLPPP
PSKPALPSNALLAPGEEQPLDLSIGSRSRANQNGGTHEQRKNHVYGANCKAAKDEHPALT
QSQNLHQPQMPQPQVSLPQPPPPQQQPSLHYAKPSPFFMDPIYSRVEKRKLLDPVGALKE
KYLRPAPLLFHPQVSAMENMTEKLESFSALKLDAPNSLQHPSHHLFNFRSPPPSLSDAIL
RKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNK
EKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGILSNLGTNISSPNSESDNHALL
DEKEDSYFSEIRNFISNSELNQACSSSEKRSELTEEEHPQSHTHAASKLEEEEEEMEGDD
EDEEGSLTEKSQDETASPATMVQGTYDEDEEPTPLPMSYEHTRRLMQ
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgatgcagtagacagc
atgtacgacacagagcccaatctcgtgactggcgagagcgcagaagaggagacagaagac
agcatcatgtcccccattgcggtggggcccacgtcccctcagccctgcaatgaggacttc
actcctaaagagggctcaccctatgaggtgcccgtctacattcccgatgatattcccatc
cctgctgacttggagctccgcgagtcgtctgttccaggggctggccttgggatctgggct
aaagtcaaaattcggatgggagaacgcttcggaccatacaacggactgcagagcgccacg
gtaaaagagaccacttatggatgggagcaaatgctgaatgatcatgaaacgtcgtctcaa
gacagctgtattaaaaaggtaatggacaacatgggcagtgtgaagttctgtctggatggg
tctctggaggccagtgggagttggctcaaatatgtgcgcacagccccttcccatgaagag
cacaacctggtcatgtgccacatcagcgaagatcagatctattataaagctattagagat
attgaaataggggaggagttactggtttacatgaaggacggagttttccccgagggctca
atggcaccgaacctggaagatgagcagatgtaccgctgtgaacactgtgatgaactcttt
acatcaaagctggagttacggcggcatcagaaatactcctgcagtagcagcaactctatc
tttgactcgctaagcgaagacttcaaacaggagcgtgaagacagcgatgagccagtgcac
gagtgcaaagactgtgaaaagatcttccctagcgagtacagtctcgggcagcatatgatc
gtgcacacagaagagagagagtataagtgtgaccagtgccctaaagctttcaactggaaa
tccaacctcattcgccatcagatgtcacatgacagtggcaagcgctttgagtgtgaaaac
tgtgataagatggatgtcacaccacaggacgtcaactttccaaaagtgttcacagacccc
agcaacctccagcgccacatccgctctcagcacgtcggtgcccgagcccacacctgccct
gagtgtggcaagacctttgccacctcctcgggcctcaagcagcacaagcacatacacagc
agtgtcaagcctttcatctgtaagtctgagcagtcttgtctaagcctcagatacaattac
cagtgtccaaagacctcccggctagctccaccccaagattgtgacagctgttgttttata
ggtgaggtgtgtcacaaatcgtatacccagttctctaacctgtgtcgtcacaagcggatg
catgcagactgccgcacccagatcaagtgtaaagactgtgggcaaatgttcagcactacc
tcctccctcaacaagcaccggcgcttttgcgagggcaagaaccattataatcccggaggc
atgttcacaccgggcataccaatgacatccagtcccattttaggcaaatccaagtctcat
cctggcttgaatcatggtggacttggcttcggtgattacttctcatccagggcacatcat
gcaggtttgcccttttccccagcaccccctgcattcccagccatttcccatggcttccca
gggatctttcccccatcactatatcctagaccgccattgttacctcctagttcactgctt
aagagcccacttagcaacagtcaagatgggaagctgcctcctcttgatgctcctactctt
tccgtggtctcatccatgcacaacagcaatggcaatgtaggaagtggtctcagcagccag
tcagaggagaaccgagagtccaaattggacttatcattctcagacaacaagaataaagtg
aagatgaacgacatgtctgatggtagtgacttggaagatgttaacacatctagtggcaca
gatctagacaccaccactggcactgtgtctggctccgacttagaaagcgaggcagagagc
gaacgggagaagagcaggaggaaaccggtgcaggagagcaagcaggacgaagtgagcagc
agttcagtatctgtctccagttcagggaacctcccttgtgagcgccctttcctctcctcc
cagcattcctttttcccaccaccagaagagcaagcacttccaccctccggggccaccact
gactccattaaagccattgcctccattgcagaaaagtactttggcccgggattcatgggc
ttgcaggagaagaagatgggctccttaaactaccattccatgtttcctttccagtttctg
cccaacttcccacattccttgtacccattcacagacagagcactcaatcctggcatgttc
ttcaaacctgagcctaaatcccctcgtgagcacatacagaaattacctacagccactggt
gcggattcaccctttgacctaaccaccaaacccaaggaggtcaaacctctccctccaccc
cccagcaagccagccttgccatccaacgccctcctggcccctggtgaggaacagcctctg
gaccttagcataggcagtcgaagccgagccaaccagaacggcggcacacatgaacagcgc
aagaatcacgtctatggcgcaaactgcaaagcagctaaagatgaacacccagcactaact
cagtcccagaacttgcaccagccccagatgcctcagccgcaagtatcccttccccagcca
cctcctccccagcagcagccgtcgctccactacgccaagccttcgccattcttcatggac
cccatctacagcagggtggagaagaggaagctattagacccagtaggagctctaaaggag
aagtacctgaggccggcaccactacttttccatcctcaggtgtctgcgatggaaaacatg
actgagaagttggaaagctttagcgctctgaaactggatgctcccaattccctccagcac
ccctcgcaccatctttttaacttccgctccccgcctccctctctctccgatgctatctta
cgcaaaggcaaggagcgatacacctgcaggtactgtgggaaaatctttcccaggtcagct
aatcttacaaggcacttacgaacacacacaggagaacaaccctacagatgtaaatactgt
gaccgttcattcagcatctcctccaacctccagcgacacgttcgtaacattcacaacaag
gaaaagcctttcaagtgccacctttgtaatcgctgcttcggtcaacagaccaatctggac
cgccacttaaagaaacatgaacatgagaatattccagtgagtcagcagtctgggatcctc
tcaaatttaggaacaaatatttcctcaccgaactctgagtctgacaatcatgcacttttg
gatgagaaggaggactcgtatttctcagagattaggaacttcatctccaatagtgagctg
aaccaggcctgtagctcctcagagaaaaggtcagagctgacagaagaagagcatcctcag
agtcacactcacgctgcctccaaactggaggaggaggaagaggagatggagggagatgat
gaagatgaggagggctcgttgacagaaaagtcacaggacgagacggcctctcccgccact
atggtgcagggcacttacgacgaggatgaggaaccgacccctctccctatgtcttacgaa
catacgcgcaggcttatgcaatga
DBGET
integrated database retrieval system
