Mycteria americana (wood stork): 142402812
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Entry
142402812 CDS
T11228
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mame03036
]
142402812 (SHOC1)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Meiosis-specific proteins
Others
142402812 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
142402812
NCBI-ProteinID:
XP_075344751
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Position
Z:complement(68901870..68955209)
Genome browser
AA seq
1441 aa
AA seq
DB search
MARQKFSICRLSLCFPPCLHQDEKYHLTGLFADDKYRKPWTRITSTQNMIAISVLDQWKK
SLSVEDFLEKKPISSEFHISNELIEVIPSSNPCSQTDIEGPFLLTKNVFQEESTQDKYLK
TDYATEFKEQWQDLCMEEELVFIDNLENFRKKLPTSSVLLSRLQFFLVKDPLLDSEGQNL
TEENIFRECLTFQNVVETQESKKELQGVKENFCTISVKDEEYFMLPVELEFCKPSNGRSD
SVKIPSYLELKELLNLAPEAMADEDMCKEVIKEDLKAEITYKIEISKYDPIPQEVSSSNS
RSMFEFCESAKYVPHLKDKMEEPLSPPCRQQRSWVNFLCTGLQEEPIPLSGNSISITEPS
REYLECLVWQSEKYRDNMSSLLLVEYQTVKPVYQHHSLTELKELLPLEVEEPMLSSLEED
WWLHLGLNPVSIETLEQLTVDASNANSLLPTEVEAFTRFTSYQLERWLEEKNSTTNQEML
SAERHQLDKVINLDMSPQSQRQYFALHMSAAPSAKIHSTNTSVEELTGGSIKNNKVEEAI
YFLNQGNKTPKSSESVSCKGVPSKQDNSSSSQKPASFALATKWDDDDSDLSNFIMLRSKH
TLTQREEENYVDSPEKVLQPEEQHMHVHKEDSSVCETVRTDEKEQENEDSVTVDIQASES
QCQAYCLLEEAATPVLKDLTHLGVLASVNWSFDSIKFDHTRFFLKQQEKVICDRFKEGKI
DEKEIMLFRHAALVHLLVTVRDLLLTCGLDTALGYLSKAKDIYKNILESCLNNIWRQLKI
VQYSSQKKHETNPKITELQCQMLNWMQSYGDEHSVKILIITRMDSEREKAALIHTLSKVD
AGLKAMDLNSEKKGTFLVCKDIISNLSRYSCVIVHNQQIGADFPWTHFSLVMEYDYSENS
CWKNVCKNLNVTYMTFKTTLPETIQMGNHCGSFLLEVQIPYVFLTTEGLLNMPDILQLLE
SKYSITFVERSSSYSLRLFGSTERYVVLTIDECTAIFLQSMEELNYEKSCDNVILKLMAL
SLQYTCCWIVFYSRERLSLEYSLRGDTLLNLVLIYATVIELTQKSEDFEVKVVLMPGIEE
TALVIRQIVDNILIASNISPHEWLDKSWLSVLPSETEKCLLTFPCINPLVAQFMSKKGSS
LNRLFLASFDQLQDLLPEVPKKVLKHFSDMTSSYSLSAAAPLETEVKGASPPENGNNFNT
FRPDYKQNHQSLELLGKAQKSTGPSRMNSEAIIPPLNHHQGFFDSGLPSYMQKKSCSSEV
ITGRKQNFFAVPKDCEDFARVGVMTSLHVQRQPFRTHYSSDHSSKNSEKEDFFATFSDYA
PQESSKSFLEEFRDTTFKSPEILIDQTPWNDSSSTGPCDSFASDSFLSDFFVDPDELQSL
NFHQIGGGSKGRRKQSPPFLWTKEKNRTDPGFAEVPEFKKRRLTYERVPGRSDGQTRLKF
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcagaagttttccatctgcagattatcactttgctttcctccctgtttacat
caagatgaaaagtatcatctcactggactgttcgctgatgataagtataggaagccatgg
actagaattacttcaacacagaacatgattgctatttcggtattggatcaatggaaaaaa
agtttatctgtggaggatttcctggaaaagaaacctatctcctctgagttccatattagt
aatgaattaatagaagttattccaagttcaaatccctgctctcagactgacatagaagga
ccttttttacttacgaagaatgtttttcaggaagaatccacccaagacaaatatttgaag
actgactatgccactgaatttaaagaacaatggcaagatttatgtatggaagaggaactt
gtttttattgataatctggaaaattttcgtaaaaaactgcctacttcatctgtgcttctg
agcagactacagttttttttagtgaaagatccccttttagattctgaaggacagaattta
acagaagagaacattttcagggaatgtttgactttccaaaatgtagtggagacgcaagag
agtaaaaaagaattgcagggggttaaagagaacttctgtaccatatctgtaaaagatgaa
gagtatttcatgttgcctgttgaattagagttctgcaaacccagcaatggcagatcagat
tctgttaagattccatcatacttggaactgaaagagttgttaaatttagctccagaagct
atggctgatgaagacatgtgcaaagaggtgatcaaagaagatctcaaagcagaaattaca
tacaaaatagaaatttccaagtacgatcccataccacaagaagtttcctccagtaatagc
agaagtatgtttgaattctgtgagtcagctaaatatgttccacatctgaaagacaaaatg
gaagaacctttaagtcctccatgcagacaacaaagatcatgggttaattttctgtgcaca
ggacttcaggaagaacctattcctctttctggtaacagtatttcgattacagagccctct
agggaatacttagaatgtttggtatggcaatcagagaagtatcgggataatatgagctct
cttttgcttgttgagtatcagactgttaaacctgtatatcagcatcattcgcttacagaa
ctgaaggaattgctaccacttgaggtagaagaaccaatgcttagctcactagaggaggac
tggtggcttcatttgggtttaaatccagtctccatagaaactttggagcaattaactgtg
gatgccagtaatgcaaacagtttgcttcctacagaagtagaagcattcacacgatttaca
tcatatcagttggaaagatggcttgaagagaagaattccacgacaaaccaggagatgctt
tctgctgaaagacatcagttggacaaagtaattaatcttgacatgtcaccgcagtctcag
aggcagtactttgccctgcatatgagtgctgcaccatctgccaaaattcacagtacaaat
acatctgtggaagagcttactggaggaagcataaaaaataataaggtagaagaggcaatt
tatttcttaaaccaaggaaacaaaacccccaaatcatctgaatcagtcagctgtaagggt
gtgccttctaaacaagacaactcatccagtagtcaaaagcctgcatcatttgcacttgct
acaaaatgggacgacgacgattctgatctgagcaactttatcatgctgagatctaaacat
acactcacccaaagagaggaagaaaattatgtagatagtcctgaaaaagtgctacaaccc
gaagaacagcatatgcatgttcacaaagaggacagttctgtttgtgagactgtaagaaca
gacgaaaaagaacaagagaacgaggacagtgttacagtcgatattcaggcatcagaaagc
caatgtcaggcatactgcctcttggaagaagcagccactcctgttctaaaagatttgaca
catctgggtgtacttgcttctgtaaattggagctttgacagcattaaatttgatcataca
aggtttttcctaaaacagcaagagaaagtgatatgtgatcgttttaaagaaggtaaaata
gatgagaaggagattatgctgttcagacatgctgctttggtgcacttgctggtgacagtt
cgagatcttctattaacatgtggcttggacacagcactaggttatttgtccaaggcaaag
gatatctataaaaacatcttagaatcctgtttgaataacatctggaggcagttgaagatt
gtacagtacagcagccagaaaaagcatgaaacaaatcccaaaataacagagcttcagtgt
caaatgttaaattggatgcaaagttatggagatgaacacagtgttaagatactaatcata
acaaggatggactctgagagagaaaaagctgccctcattcacactttatctaaagtagat
gcaggtttaaaagctatggatttgaattctgagaaaaaaggaacctttttagtttgtaaa
gatatcataagcaaccttagtagatattcctgtgttattgtacataatcagcaaattgga
gctgacttcccttggacacacttctctttagtaatggaatatgattattctgaaaactct
tgctggaaaaatgtgtgcaaaaatctgaatgttacttacatgacttttaaaaccaccctc
cctgaaacaatacaaatggggaatcactgtggttcctttcttctggaggtacagattcca
tatgtatttctgacaactgaaggtcttcttaatatgccagatattcttcagcttttggaa
tccaagtacagcattacctttgttgaaagaagcagtagttactccttaaggctctttgga
agtacagaacgatatgttgtgttgacaatagatgaatgtactgctatctttttgcagagt
atggaagaactaaattacgagaaatcctgtgacaatgtaatactgaagctgatggcatta
tcactccaatatacatgctgttggattgttttctattccagagaaagactgagtttagaa
tacagtctcaggggagacactctgcttaaccttgtcttaatttatgccactgtaattgaa
cttacacagaagtcagaagactttgaagtgaaggtagttcttatgccagggattgaagag
acagcactggtaattcgtcagattgttgacaacattttgatagcatctaatatcagtcct
catgagtggctggacaaatcctggctttctgtcttgccatctgagacagagaaatgcctg
cttacttttccatgtatcaaccctctggttgctcagtttatgtcgaagaagggatcttcg
ctgaacaggttgtttcttgcaagctttgatcaacttcaggatcttctgccagaggttcca
aaaaaagttttaaagcattttagtgacatgacatcttcgtacagcctaagtgctgctgct
ccactagaaacagaagtgaaaggtgcatcacccccagaaaacgggaataacttcaataca
tttcgtccagattataaacaaaatcatcagtctttagagctgcttggtaaggcacaaaag
agcacaggaccgtctcgtatgaattctgaagccataattcctccattgaatcatcatcag
ggtttttttgactctggtcttccaagctatatgcaaaagaaatcatgttcttcagaagta
attacggggaggaagcagaatttctttgctgtgccaaaggactgtgaagattttgctcgt
gtaggtgttatgacttctcttcatgttcaaagacagcctttcaggacgcactatagctct
gatcattcttccaaaaactctgaaaaagaggatttctttgcaactttcagtgactatgca
cctcaggagagttctaagagttttctagaagaattcagagacacaacatttaagagccca
gaaattctgattgaccagaccccatggaatgactcttcatccacaggcccatgtgattca
tttgcatctgatagttttctctctgatttctttgttgacccagatgaacttcaaagtctg
aattttcaccaaataggtggaggatctaaaggaaggagaaaacaaagtccaccattctta
tggacaaaagaaaaaaatagaacagatccaggatttgcagaagtaccagagttcaaaaaa
aggagattgacttatgaaagagtccctggaagaagcgatggacaaacacgtcttaaattc
ttctga
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