Mycteria americana (wood stork): 142403351
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Entry
142403351 CDS
T11228
Symbol
DHX16
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142403351 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mame03041
]
142403351 (DHX16)
Enzymes [BR:
mame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142403351 (DHX16)
Spliceosome [BR:
mame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
142403351 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
142403351
NCBI-ProteinID:
XP_075345701
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MAAATAALERWVSGELQELLGLSGRHVPAFLVALARRSRSVEELLERLRETEALRVEEPR
VRALRAGALGEGPPGSAAGAPGARAAERRRRGSCSAAARATDWSTAMTRGQAPPPASAPS
HGSSPQHCRRFFPPPPPPPPPPPLRVARDLQPIAAAAPILGVPPDYRGLGVSSCPSGVTA
DAQSPPASQGSRSPPRSRKRNGKRRNGKRLRDLEERDAFAERLRRRDRDRTRAVLARPDA
KAYEEAQKRLKIAEEDQKTMVPELRKKSRREYLAKRERDKLEELEAEIADEEYLFGKKRX
RERKRRELEYKRRVRDLAREYKRAGEKEKLEKSNRYYIPEETRGKPPPHVFSVLSRSLLS
PPRLFLNPPPPAPDSSLAARKMGFRPDPLQHPKSFFHPPKIPPVTPEDPLQHPRSPLYPL
KVPPITPRISSSTPNPPLSTQGPSCHGGGFRGDTGVVSPLSSPPRRRSPEREEATGGEEE
RMAPRDEQRRWEEERIGAASLRFGGAMPPASGPPRDYDFVLEEDEMIQFVSAVQMKGTEP
DKEAPAPVPEAERRRQSAQEVRRSLPIFPYRRELVAAIAQHQILVIEGETGSGKTTQIPQ
YLHEEGYTRQGLKIGITQPRRVAAMSVAARVAVEMGTKLGNEVGYSIRFEDCTSERTVLK
YMTDGMLLREFLTEPDLGSYSVIMVDEAHERTLHTDVLFGLIKDIARFRPQLKVLVASAT
LDTQRFSAFFDQAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQPPGDILVF
LTGQEEIEACVELLQERCRRLGSRLPELLVLPIYANLPSDMQARIFEPTPPGARKVVVAT
NIAETSVTIDGIVYVLDPGFCKQKSYSARTGMESLVVTPCSRASANQRAGRAGRVAPGKC
FRLYTAWAFQHELEETPVPEIQRADLGSLVLLLKSLGINDLIHFDFLDPPPHETLVLALE
QLYALGALNHLGELTTLGRRMAELPVEPMLAKMILASEQYGCTEEVLTVAAMLSVNNAIF
YRPKDKVLHADSARLGFHLPGGDHLVLLNVYSQWVASGHSLQWCYEHFVQARSLRRARDV
REQLEGLMERVEVAPSSCAGDYALVRKAITAGFFYHTARLTRGGYRTVKHQQTVFIHPNS
SLFEEQPRWVLYHELVFTTKEFMRQVIEIDSAWLLEVAPHYYQAKELED
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacggcggcgctggagcggtgggtgtccggggagctgcaggagctgctg
gggctgagcgggcggcacgtccccgccttcctggtggccctggcgcggcggagccgcagc
gtggaggagctgctggagcggctgcgggagaccgaggcgctgcgggtggaggagccgcgc
gtgcgcgcccttcgcgcgggagctctgggagaaggtcccccgggaagcgccgcgggagcc
cccggggcccgagcggctgagcggcggcggcgcgggagctgcagcgccgcagccagggct
accgattggtcgacagcgatgacgagggggcaggccccgcccccagcttccgccccttcc
cacggctcctccccccagcactgccgacgcttcttcccgccgccgccgccaccacctccg
ccgccgccgctccgagtcgcccgagacctccagcccatcgccgccgccgcccccattctt
ggggttccccctgattataggggtctcggggtttcctcctgcccctcgggggtcaccgcg
gatgctcagagtccccctgcttctcagggctcccggagccccccgaggagccggaagcgg
aatgggaagcgtcggaacgggaaacggttgcgggacctggaggaacgcgacgccttcgcc
gagcgtctgcgccgccgggaccgcgaccgcacccgcgccgtcctcgcccgccccgacgcc
aaggcttacgaagaagcccaaaaacgcctcaaaatcgccgaagaagatcaaaaaaccatg
gttccggaattacgtaaaaaatcccgtcgggaatatttagccaaacgagaacgagataaa
ttagaagaattagaagcggaaatcgccgacgaggaatatcttttcgggaagaagcgctga
cgggagcggaagcggcgggagctggagtacaaacggcgcgtgcgcgacctggcccgcgag
tacaaacgggccggggaaaaagaaaaattagagaaaagcaaccggtattacatccccgag
gaaacgcggggcaagccccccccccacgtcttctccgtcctctcgaggtcccttttgtca
cctccgcggctttttctcaacccccccccccccgcccccgattcctctctcgccgcccgc
aaaatgggttttcgtcccgatcccctccagcaccccaaatccttcttccatccccccaag
atccctcccgtcacccctgaggaccccctccagcaccccagatcccctctctatcccctc
aaggtgcctcccatcacccccaggatctcctccagcaccccaaatccccctctatccacc
cagggtccctcctgccacggcggggggtttcggggggacaccggggtggtttcaccgctg
tcatcgcctccccgtagaagatcccccgagcgcgaggaagcgacaggaggggaggaagag
cgcatggccccccgggacgagcagcggcgatgggaggaggagcgaatcggggcggcttcc
ctgaggtttgggggcgcgatgccgcccgccagcggccccccaagggattacgacttcgtc
ctggaggaagatgagatgatccagttcgtcagcgccgtgcagatgaagggcaccgagcct
gataaggaggcgccggcgccggtgccggaggcggagcggcggcggcagtcggcgcaggag
gtgcgccggagcctgcccatcttcccctaccgccgggagctggtggccgccatcgcccag
caccagatcctggtgatcgagggggagacgggatccggcaaaaccacccagatcccccag
tacctgcacgaggagggctacacgcggcaggggctgaagatcgggatcacgcagccgcgg
cgcgtggccgccatgagcgtggccgcccgcgtggccgtggagatgggcaccaagctgggc
aacgaggtggggtacagcatccggttcgaggactgcacgtcggagcggacggtgctgaag
tacatgacggacgggatgctgctgcgggagttcctgaccgagcccgacctcggctcctac
agcgtgatcatggtggacgaggcccacgagcgcaccctgcacaccgacgtcctcttcggg
ctcatcaaggacatcgcccgcttccgtccccagctgaaggtgctggtggcctcggccacc
ctcgacacccagcgcttctccgccttcttcgaccaggcccccgtcttccgcatccccggg
cgccgcttccccgtcgacatctactacaccaaggcgcccgaggccgactacctggaggcg
tgcgtggtgtcggtgctgcagatccacgtcacccagccccccggggacatcctcgtcttc
ctcaccggccaggaggagatcgaggcctgcgtggagctgctgcaggagcgctgccgccgc
ctgggctcccgcctgcccgagctgctggtgctgcccatctacgccaacctcccctccgac
atgcaggcccgcatcttcgagcccaccccccccggcgcccgcaaggtggtggtggccacc
aacatcgcggagacgtcggtgaccatcgacgggatcgtctacgtgctggacccggggttc
tgcaagcagaagagctacagcgcccgcaccggcatggagtccctggtggtcaccccctgc
tcccgggcctcggcgaaccagcgtgcgggccgtgcgggccgggtggctcccgggaagtgt
ttccgcctctacacggcctgggccttccagcacgagctggaggagacgccggtgcccgag
atccaacgcgccgacctgggctccctcgtcctgctcctcaagagccttggcatcaacgac
ctcatccacttcgacttcctggacccgccgccccacgagacgctggtgctggcgctggag
cagctctacgccctgggcgccctcaaccacctgggcgagctcaccacgctgggccggcgc
atggcggagctgccggtggagcccatgttggccaagatgatcctggcctccgagcagtac
ggctgcacggaggaggtgctgacggtggcggccatgctctccgtcaacaacgccatcttc
taccggcccaaggacaaggtgctgcacgccgacagcgcccgcctgggcttccacctgccc
gggggcgaccacctcgtcctgctcaacgtctacagccagtgggtggccagcgggcactcc
ctgcagtggtgctacgagcacttcgtgcaggcgcgctcgctgcgccgggcgcgggacgtg
cgggagcagctggaggggctcatggagcgcgtcgaggtcgccccctcctcctgcgccggc
gactacgccctcgtccgcaaggccatcaccgccggcttcttctaccacacggcgcggctg
acgcgggggggctaccgcacggtgaagcaccagcagacggttttcatccaccccaacagc
tccctcttcgaggagcagccccgctgggtgctctaccacgagctcgtcttcaccaccaag
gagttcatgcgacaggtgatcgagatcgacagcgcctggctgctggaggtggccccccat
tattaccaggccaaggagctggaggac
DBGET
integrated database retrieval system
