Mycteria americana (wood stork): 142404599
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Entry
142404599 CDS
T11228
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mame04121
]
142404599 (PDZRN4)
Enzymes [BR:
mame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142404599 (PDZRN4)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
142404599 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-rbx1
PDZ_Tricorn
TRAF3_RING
Prok-RING_4
IBR_1
Motif
Other DBs
NCBI-GeneID:
142404599
NCBI-ProteinID:
XP_075347714
LinkDB
All DBs
Position
1:32930563..33184977
Genome browser
AA seq
1059 aa
AA seq
DB search
MGFDPSRFAAPVAAELQCKLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCQPLA
AAELRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGPPPPPGPAEPEPQ
PQPQPQPRGGLPPGRSGGGSAGQPRRPEPGAPPRPRAGGGHRCLRALRGGGGGGGGSPEP
GPELKREALRWSRREKSLLAQLSALQSEVQLTARRYQAKFGQYMSHISSITRDLAGSQPG
KGGEPKPLTIMLHRENDTLGFNIIGGRPNQNNQEESAEGIYVSKILENGPADKAEGLQIH
DKIIEVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPVSKAHGSSQDVRLVDASTQTD
ITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRAED
FEYEEVELCRISSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQIN
GQDVQNREEAVALLSSEECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNE
AMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQ
NSATLQSKRELGHSQDTLGSVELQCNESFVSGEYIESDFIGNPEEECERFRQLLELKCKI
RNHGEYDLYYSSSTIECNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYG
DIWALHDEGFRNYNTSIDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPD
NSLQRMISITNRKNLRSTTVANQSSSGQSKRETTSAKTKPTEQNSAAEDAVLASESGKFT
DQEKQSSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCK
DSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKM
GRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMK
KRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcgcttcgcggcgccggtggcggcggagctgcagtgcaagctg
tgcgggcgggtgctggaggagccgctgtccacgccgtgcgggcacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcggcggcgctgcccgctgcgctgccagccgctggcg
gccgccgagctgcgccccgtcctgcccctgcgcagcctcgtccagaagctggaggtcaag
tgcgactacagcccgcggggctgcggccgcaccgtgcggctgcgagagctgcccgcccac
ctcgcggcgtgccgctacgggccgccgccgccgcccggccccgccgagccggagccgcag
ccgcagccgcagccgcagccgcggggcgggctcccccccggccgctcggggggcggctcc
gcggggcagccgcggcggcccgagccgggggcgcctccgcggccgcgggcgggcggcggg
caccgctgcctgcgggcgctgcggggcggcggcggcggcggcggcggcagcccagagccg
ggtcccgagctgaagagggaggccctgcgctggagcaggagggagaagtcgctgctggcg
cagctctcggcgctgcagagcgaggtgcagctgacggcgcggcggtaccaggcgaagttc
ggccagtacatgagccacatcagcagcatcacccgggacctggcgggcagccagcccggc
aagggaggagaacccaaaccattaacaatcatgctacaccgagaaaatgatactttggga
ttcaatattataggaggacgacccaatcagaacaatcaggaggaatctgctgagggaatt
tatgtgtcaaagattttggaaaatggacctgcagacaaagcagaaggcctgcaaattcat
gacaagattattgaggtcaatgggaaggacctctccaaggccactcacgaagaggcagtg
gaagcttttcgcaatgccaaggagccaattgtagttcaggttttacgacgagccccagtt
agcaaagctcatggtagctctcaggatgttcggcttgtggatgccagcactcagactgac
atcactttcgagcacattatggctctggccaaactaaggccttccacaccgcccgttcct
gatatctgcccttttctgctttcagacagctgccattctcttcacccagtggagcatgaa
ttttatgaaggtaatgagtatctttccagcctgcctgctgatgcagatagagcagaggac
tttgagtatgaggaggtggagctgtgccgcattagcagccaggagaagctggggctgact
gtctgttacagaaccgatgacgaggaggacacggggatctatgtcagcgaggttgatcca
aacagcattgctgccagagatggacggatccgtgaaggagatcgcattttgcaaataaat
ggccaggatgtccagaatcgggaagaggcagtggcattgctctccagcgaagaatgcaag
aaaatcgtgttgctggtcgcaagaccggagatgcagctggaagaagggtggctggatgat
gaaaggaatgaattcttagaggagttaaacttggaaatgttggaagagcagcataatgaa
gcgatgcagtacacagccaatgaggtggagcagccaaagaaacatgaagaggaggatggc
actacagacactgcaacctcatcatccaacaatcatgagaaggacagtggggtgggacct
acagatgaaagtctgcgtaatgacgagagctcggagcaagaaaatgcacctgaggagcag
aacagcgctaccctgcagagcaaaagggagctgggccacagccaagatacgttaggaagc
gttgagctccagtgcaatgaaagctttgtgtctggggagtacattgagtctgatttcata
ggaaatccagaggaggaatgtgaaaggtttcggcaactgttggaactgaagtgcaagatt
cgaaaccatggggagtatgacctgtattattcaagcagcacaatagagtgcaacagaaga
gagcaagatggagtggagcatgagctgcagctactcaatgaggaactgaggaacattgaa
ctcgaatgtcagaatattatgcaagctcaccggctccaaaaggtgagggatcagtacgga
gacatttgggctttacatgacgaagggttcaggaattataacaccagcatagatgtacaa
agaggcaaactggatgacatcatggagcaccctgagaagtccgacaaggacagctccagt
gcctacaacacggccgaaagttgcaggagcactccgctgactgtggaacgatcccctgat
aactctctccagaggatgatcagcataaccaacaggaaaaacctgaggagcacaactgtg
gctaatcagtcatcctcaggacaaagcaagagggagacaacctcagccaaaaccaaaccc
accgagcaaaacagtgctgctgaggacgcagtgctggcatcagaaagcggcaaattcaca
gaccaggaaaagcagagcagcgaacacattccctacctgtctccatatcacagctcttct
tacaggtacgggaatatacctgctcatgcaaagcattatcaaagctatatgcagctgatc
cagcagaagtctgctgtggagtacgcccaaagccagctcagcctggtgagcatgtgcaaa
gactcgcagaagtgtgcagagcccaagatggaatggaaagtgaaaataaggagtgatggg
acaaggtacatcacaaagagaccagttcgagacagaatcctgaaggaacgtgccttaaaa
attaaagaggagcgcagtgggatgacgacagatgatgatacgatgagtgagatgaagatg
ggtcgctactggagcaaagaagagcggaagcagcatttggtgcgagctaaggagcagagg
aggcggcgggagttcatgatgaggagcaggctggagtgtcttaaggaaagtccgcagagt
ggcagcgagggcaaaaaggaaattaacattattgaactgagtcacaaaaagatgatgaaa
aagagaaacaagaaaatcttggacaactggatgacaatccaagaactgatgacacatggt
gctaaatctccagacggcacaagagtgcacaatgcctttttatcagttactactgtatga
DBGET
integrated database retrieval system
