Mycteria americana (wood stork): 142404980
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Entry
142404980 CDS
T11228
Symbol
PCDH8
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mame04515
]
142404980 (PCDH8)
Cell adhesion molecules [BR:
mame04515
]
Cadherins
Protocadherins
142404980 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
142404980
NCBI-ProteinID:
XP_075348096
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Position
1:187774605..187778522
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AA seq
998 aa
AA seq
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MSPLRLLAVACLLALSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPRAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPSFAQGSVT
VELPEDAPPGSLLLDLDAADPDEGPNGEVVYAFGSQVPPEARRLFRLDPRSGRLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVIVRLADVNDNAPRISISALRGAASAAGVAYVS
EAAASESFVALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTLVKVRMVDQNDNPPVIIHPVLTNGTVEISVSSKTSRDSLVAQIKARDADDG
ANAELTFAFLEEPQQDLFTINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQEIAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRR
KKGNEIKNNSSLKEQIDISHLEKGQQEESSRRGNVFEVRTFPSKTSFTSPDPSPAAEEIS
TTESGSDSACLYEGQKRLRGPSGEQGFAATPSYGKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLYPAPSTRYLGPQTDTAEKV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgtcgcctgcctgctggccctgtcccgctgcaagacg
gtgaggtaccgcaccgacgaggagggcgcgccgggcacggtgatcggtacgctggccgac
gagatgccggtgaaggcgccgggggagatgagcttccgcctgatgcggcagttcagcaac
agctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcggggctg
gaccgggagcggctgtgcgggcaggccccccagtgcgtcctggccttcgatgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgcgacatcaacgac
aacgcgccacgcttcccccgtgcccagatggcactggaggtgtcagagagtgccgcacca
ggcacccgcctgccgctggaggtggctgtggatgaggatgtgggctccaactccatccag
agcttccaggtctccctcaacagccactttggcgtggaggcacagacgcgggcggatggg
gcacgctgcgccgacctggtgctgctccaggagctggaccgtgagcgccagccctcctac
acgctggagctggtggccaaggatggtggcagcccagcacgctcgggcacagccaccgtg
cacgtccgtgtcctcgatgccaacgacaacagcccttcctttgcccagggctcggtcacg
gtggagctgcccgaggacgcgccacccggctccctgctgctcgacctggatgccgccgac
cccgacgagggccccaacggcgaggtggtctacgccttcggcagccaagtgccccccgag
gcgcggcggctcttccgcctcgacccacgttcgggccgcctcacgctggaggccgccgtg
gactacgagcgcacccgcacctatgagctggatgtgcgtgcccaggaccgtggcgccagt
ccccgtgccgccacctgcaccgtcatcgtgcgcctcgccgatgtcaacgacaacgcaccg
cgcatcagcatcagtgctctccgcggtgccgccagcgccgctggtgtggcctatgtcagc
gaagcggcagccagcgagagctttgtggccctcgtcagtgcctcagaccgtgactcgggt
gccaatgggcaggtgcgctgcagcctccgcggccatgaccactttgccctgcagcgcgcc
tatgaggacagctacatgatcgtcaccacagcggcactggaccgcgagcgcatccccgag
tacaacctcaccgtggtggccgaggacctgggctcgccgcccttcaagactgtccgccag
tacacagtgcgggtgagcgatgagaatgacaatgcgccactcttcgccaagcccctctat
gaggtggctgtgccagagaacaaccccccaggtgcctatatcaccactgtggtggcccgc
gaccctgatctgggccacaatggtaaggtcacctaccgtctcctggagacacaggtcatg
ggggcccccatctccacctatgtctccgtggaccccgccaccggggccatctatgccctc
aggacgttcaactatgagatcctcaagcagttggacctgaggatccaggccactgatgga
ggctccccgcagctttccagcagcacccttgtcaaagtgaggatggtggaccagaacgac
aaccctcctgtcatcattcacccagtgctcaccaacgggacggtggaaatcagcgtgtcc
agcaagacctcccgcgactccctggtggcccagatcaaagctcgagatgcagatgatggg
gccaatgccgagctcacctttgccttcctggaagagccccagcaggaccttttcaccatc
aacccaagtactggggacattgtgctgaggggtgacctctctgaagagctgggacagctg
ttcaaggtcatccttactgtgacagacaacggcagaccccccctggccacgaccgccaca
gtcaacttcctggtgactgccactgctccttccagtatccaggagatagccaagcccagc
tcctgggaaggaaaggctttgcagtgggacatccctctgatcgtgatcatcgtcctggcg
ggcagctgcaccctcctcctggtggctataatcaccatcgccaccacctgcaacaggcgt
aagaaggggaatgagatcaaaaacaactcttccttgaaggagcagatagatatctcccac
ctggagaagggccagcaggaggagagcagccggagggggaatgtgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccccgacccttctccagctgccgaagagatctcc
accactgagagcggcagcgacagcgcttgcctctacgagggccagaagaggctccgagga
ccaagtggggagcagggtttcgctgccactccaagctacggcaaggagcctgctcccccc
gtggccatttggaaggggcactcgttcaacaccatctccggccgagaggcagagaagttc
agtggcaaagacagtggcaaaggcgacagcgattttaacgacagcgactcggatatcagt
ggagatgccctgaagaaagatctcatcacacacatgcagaatggtctgtgggcatgtacg
gccgagtgcaagatcctgggccactcagaccgctgctggagcccctcctgcggccgagcc
aaccctcacccctctccccatccttcagcacccctctccaccttctgcaagagcacgtcc
ttgcccagggatccccttcgcagggacaacttttatcaagcccagctgcccaaaacagtg
gggcttcagagcgtctacgagaaagtgctgcacagggactttgaccggacgatcacgctg
ctctccccgccgcgccccgcacggctccctgaccttcaggagattggggtgcccctctac
ccagccccctcgactagatacctgggcccccagactgacacagctgagaaagtgtag
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