Mycteria americana (wood stork): 142405584
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Entry
142405584 CDS
T11228
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142405584 (TRIM71)
04121 Ubiquitin system [BR:
mame04121
]
142405584 (TRIM71)
Enzymes [BR:
mame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142405584 (TRIM71)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142405584 (TRIM71)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142405584 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
142405584
NCBI-ProteinID:
XP_075349330
LinkDB
All DBs
Position
2:complement(46710095..46773569)
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AA seq
882 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGGSSCGGPPRRLHV
LPCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVV
VVAAAADEQKNGRAAGAGPAAGSGAGGGGGGNNRHHGRPPPPHRAAGSSPAAAASAAPSS
TSSSSSSGGGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQR
VRLTKDHFIERFAAAPGPAAAAGPAAPLALSPPYPASPYNILSVFPDRASYCQHHDDEVL
HFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQA
QAVAEQVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQ
NLNKLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQ
ALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDMISA
VVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSGRSY
IGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKFGTL
GSRPGQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYPWDV
AVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDF
NNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGS
FLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcctccaactcctccacctcctcgtcctcctcgcagacctccagc
tcctccgggggcggcggcggcggctcctcctgcgggggcccgccgcggcggctccacgtc
ctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccggcgcg
ggggacgcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccc
tcgggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtcgtc
gtcgtggccgccgccgccgacgagcagaagaacggccgcgccgccggggccggccccgcc
gccggctccggcgcgggagggggcggcggcggcaacaaccgccaccacggccgcccgccg
ccgccgcaccgcgccgccggctcctcgcccgccgccgccgcctcggccgcgccctcctcg
acgtcctcctcctcctcctcgggcggcggcggcggctcggcggcgctcctgctgcggcgg
ccccacagccggcagggcgagccccgctgcagctcctgcgacgagggcaacgccgccagc
tcccgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgc
gtccgcctcaccaaggaccacttcatcgagcgcttcgccgccgcccccggccccgctgcc
gccgccggccccgccgcgccgctcgccctcagcccgccctaccccgcctcgccctacaac
atcctctccgtcttccccgaccgggccagctactgccagcaccacgacgacgaggtactg
catttctactgtgatacctgttctgtccccatatgtcgggaatgtaccatgggccgacat
gtgggtcacagctttatctacctccaagatgccctccaggactccaggactctcaccatt
cagctcctggcagatgctcagcaaggacgacaggctattcaactgagtattgaacaggcc
caggctgtggcagagcaggttgagatgaaagcgaaggtggtacagtctgaagtcaaagca
gtgactactagacataagaaggccttggaagagcgtgagtgtgagctgctctggaaggtg
gaaaagattcgtcaagtcaaggctaagtcactctacttgcaagttgaaaagttacgtcag
aacctaaataagctggacaacaccattagtgctgttcagcaggtcctggaggagggtcgt
accatggatattcttctggctcgggaccgcatgctggctcaggtgcaggagctgaagaac
gtgagaggccttctccagccacaggaagacgacaggatcatgttcactccccctgaccag
gcgttgtatatggccattaaatcaatgggctttgtcagcagtggggcttttgctcctctg
accaaagccaccggggaaggcctcaagcgtgcactgcagggcaaagtggcctctttcaca
gtgataggctatgaccatgatggggagcctcgcctttcaggaggtgacatgatctctgcc
gtggtgatgggcccagatggaaacctttttggggcagatgtcagtgatcagcagaacggg
acctacctggtcagctaccgtccacagctagagggagagcacctagtatccgtgatgatg
tgcaaccaacacatcgagaacagccccttcaaagttgtggtgaaatctgggcgcagctac
ataggcattgggctgccggggctctcctttggcagcgagggagacagcgatggcaaactc
tgtcgcccctggggggttagtgtagacaaagaaggctacatcatcgttgctgaccgcagt
aataaccgcatccaggtgttcaaaccatgcgggaccttccatcacaagtttggcacactg
ggatcccgaccgggccagttcgatcgccctgccggcgtggcctgtgacatctcgcgtagg
atcgttgtggctgacaaggacaatcatcgcatccagatcttcacgtttgaggggcagttc
attctgaagtttggagagaaaggaacaaagaacgggcaattcaattacccatgggatgtg
gccgtcaacgcagagggcaagatcctggtctccgacacaaggaaccatcgcgttcagctg
tttgggcccgacggtgtgtttcttaacaagtatggcttcgaaggggcactctggaagcac
tttgattcccccagaggtgtgactttcaatcacgagggccacttagtagtgacagacttc
aacaaccatcgccttctggtcatccatccagattgccagtcagcacgctttctgggctcg
gagggcaccgggaacggccagttcctgcgcccgcagggagtggcggtggatcaagagggg
cgcatcatcgtggccgattccaggaaccaccgagtgcagatattcgagtccaatggtagc
tttttatgcaagtttggcactcagggaagcggctttggtcagatggaccgtccttcaggt
atagccgtcacccctgatggcatgattgttgtggtcgactttggaaacaatcgaattctc
gtcttctaa
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integrated database retrieval system
