Mycteria americana (wood stork): 142405648
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Entry
142405648 CDS
T11228
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mame Mycteria americana (wood stork)
Pathway
mame03018
RNA degradation
mame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142405648 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
142405648 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142405648 (LSM8)
03041 Spliceosome [BR:
mame03041
]
142405648 (LSM8)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142405648 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
142405648 (LSM8)
Spliceosome [BR:
mame03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
142405648 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
142405648
NCBI-ProteinID:
XP_075349492
LinkDB
All DBs
Position
1:complement(27745575..27750806)
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgccttggagaattacattaaccgtactgttgcagtaattacttctgatgga
agaatgattgtgggaaccctcaaaggttttgatcagaccattaacttgattttggatgaa
agccatgaacgagtgttcagttcttcacaaggagttgagcaagtagtgctgggattatac
atcgtaagaggtgataatgttgctgtcattggtgaaattgatgaagagacagattcagct
cttgacttggggaatattcgagcagaacctttaaactcagttgtgcattga
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