Mycteria americana (wood stork): 142406777
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Entry
142406777 CDS
T11228
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
mame Mycteria americana (wood stork)
Pathway
mame04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142406777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mame03000
]
142406777
Transcription factors [BR:
mame03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
142406777
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
142406777
NCBI-ProteinID:
XP_075351827
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All DBs
Position
2:131951516..131953454
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AA seq
405 aa
AA seq
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MSSPDAGYASSDDQAQGRCSLPTMMPAVGPCPWAESLSPLGKAKAKGEAAPSSSGAAGGR
SKSEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEA
ERLRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAGPGLGGEAGGGGGRMCV
EGLGLPYAEQGYAAAAAGAGHYRDCPPLGAAFDGYSLPTPDPSPLDAAESEAPFFAAGLQ
EECALVPYGYAPHPAAEYPPAAAESPAGAALRRHLPPGEALGPGGSLQGLLGCPAPLHAY
YGQACQPPGPGRGPLPPGAVGQPSPPPEAVPCREQLEHLPQEELLGEVDRTEFEQYLRFA
CKPELGLPFAGHDAAGLPAPEGAGPISAAVSDASSAVYYCGYPDV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggcgcaggggcggtgctcg
ctgcccaccatgatgccggccgtgggcccctgcccgtgggcagagtcgctgagcccgctg
ggcaaggcgaaggcgaagggcgaggcggcgccgtcgtcgtcgggggcggcgggcggccgg
agcaagagcgaggcgcggatccggcggcccatgaacgccttcatggtgtgggcgaaggac
gagcgcaagcggctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatg
ctgggtaaatcgtggaaggcgctgtcgctggcggagaagcgtccgttcgtggaggaggcg
gagcggctgcgggtgcagcacatgcaggaccaccccaactacaagtaccggccgcggcgg
cggaagcaggtgaagcgcctgaagcgggtggagagcggcttcctgcagcacggcctggcg
gaggcggcggggcccgggctgggcggcgaggccggcggcggcggcggcaggatgtgcgtg
gagggcctgggcctgccctacgccgagcagggctacgcggcggcggcggcgggcgcgggc
cactaccgggactgtccgccgctgggcgccgccttcgacggctacagcctgccgacgccg
gacccgtcgccgctggacgcggcggagagcgaggcgcccttcttcgcggcggggctgcag
gaggagtgcgcgctggtgccctacggctacgccccgcacccggcggccgagtacccgccg
gcggcggccgagagcccggcgggcgcggcgctgcgccggcacctgccgcccggcgaggcg
ctggggccgggcggctcgctgcaggggctgctgggctgcccggcgccgctgcacgcctac
tacgggcaggcgtgccagccgccgggcccggggcgcggcccgctgccgccgggggcggtg
gggcagccgtcgccgccgcccgaggcggtgccgtgccgggagcagctggagcacttgccg
caggaggagctgctgggcgaggtggaccgcaccgagttcgagcagtacctgcgcttcgcc
tgcaagcccgagctggggctgcccttcgcgggccacgacgccgccgggctgccggcgccc
gagggcgcggggcccatctccgcggccgtgtcggacgccagcagcgccgtctactactgc
ggctaccccgacgtgtga
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