Mycteria americana (wood stork): 142406969
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Entry
142406969 CDS
T11228
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mame Mycteria americana (wood stork)
Pathway
mame03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142406969 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mame03021
]
142406969 (TAF5L)
03036 Chromosome and associated proteins [BR:
mame03036
]
142406969 (TAF5L)
Transcription machinery [BR:
mame03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142406969 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
142406969 (TAF5L)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
142406969 (TAF5L)
STAGA complex
142406969 (TAF5L)
TFTC complex
142406969 (TAF5L)
SAGA complex
142406969 (TAF5L)
SLIK complex
142406969 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
TFIID_NTD2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
Ge1_WD40
WD_LRWD1
eIF2A
Nbas_N
Motif
Other DBs
NCBI-GeneID:
142406969
NCBI-ProteinID:
XP_075351978
LinkDB
All DBs
Position
3:82708725..82730712
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDMPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGVAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccgt
cagtatgtggactcggaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggcggagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttc
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaagtacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgctctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cctgccaagaggactgactaccagctctacgctggtgggagctcctcacgcaacgagagc
aacggcctggagcccagcgacatgcctgcttccattctgcagaacgaggcagcgctggat
ttactgcaggacagcattaaacgtgtcaaggatgggcccccttccttaacgaccatctgt
ttctatgccttctataacacggagcagttgctgaacactgcagagatttcaccaaatagc
aagctgcttgctgctgggtttgataattcgtgtgtgaagctgtggagcctgcgttccagg
aagttaaaatctgaaccccacctcgttgatgtgtcccgtatccgcctggcttgtgacatc
ctggatgaggaggaggaagaggacgacagcgcaggcacagaaatgaagatcctgagagga
cactgtggacctgtgtatagcacaaggttcctttcagacagttcgggactcttatcttgt
tccgaggacatgtccatcagatactgggacctcagaagctttacaaacactgtgttgtac
caagggcatgcctatcctgtctgggatttggatattagcccctgcagcctgtactttgcc
agtggttcccacgatcgcactgcaaggctctggtcatttgatcggacgtacccgctgcga
atatacgcaggccatttggcggacgtagactgtgtcaagttccaccccaattccaactac
ttagcgacaggctccacggacaaaactgtacgcttgtggagcactcagcaaggcaactca
gtgcgtcttttcacggggcaccgtggccctgtgctagcacttgcattttctcccaatggt
aagtacctggcatcagcaggtgaagaccagcggctaaagctgtgggacttggcatcagga
actctttacaaagaactgagagggcacacggacaacataaccagccttacttttagccct
gacagtagtttaattgcttcagcgtcgatggacaattcagtccgggtctgggacattcgg
aacacttactgcaacgcccctgcagatgggtcttccagtgaactggttggtgtatatacc
ggacaaatgaataatgtactgagcgtacagtttatggcctgtaatcttcttctagtgact
ggagttgcacaagaaaatcaggaacattaa
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