Mycteria americana (wood stork): 142407877
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Entry
142407877 CDS
T11228
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
mame Mycteria americana (wood stork)
Pathway
mame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142407877 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mame04121
]
142407877 (TRIM54)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142407877 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
CYP38_PsbQ-like
RHH_9
Prok-RING_4
Zn_ribbon_FGT1_2
FlgN
CoiA_N
CagA
Motif
Other DBs
NCBI-GeneID:
142407877
NCBI-ProteinID:
XP_075353656
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Position
3:complement(343693..347053)
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AA seq
414 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKVGGPGGAGE
GPGGCPPSRPSRPSRPVPSRPVLSQSELSDGIAMLVAGNDRIQAIITQMEEICRTIEENG
RRQKQHLGLRFDSLYSILEERKKELLQSIAREQETKVQRVRGLIRQYGDHLEASSKLVES
AIQAMEEPQMAVYLQHSKELLKKITDMSKVSMSSRPEPGYENMDHFSINVDYVAEMLRTI
EFQTEPLGEDEADGPGDGSEAAGDEDRLDSLEVPEAVEDVGPRQKPASSPHGQH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtggggctgaagccgctgctggcggaggcgcggagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcgggcggccggttccggtgcccgtcg
tgccgccacgaggtggtgctggaccggcacggggtgtacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcggccaggcccctgcacgccaaggcc
gagcagcacctcatgtgcgaggagcacgaggacgagcggatcaacatctactgcctgcgc
tgcgaggcacccacctgctccctctgcaaggtcttcggggcgcacaaggactgcgaggtc
gcgccgctgcccgccgtctaccagcgccagaaggtgggtggccctgggggggctggcgag
gggcctgggggctgcccgcccagccgaccctcacgcccttcccgtcctgtcccatcccgt
cccgtcctgtcccagagcgagctcagcgatggtattgccatgctggtggcggggaacgac
cgcatccaggccatcatcacccagatggaggagatctgccgcaccatcgaggagaatggc
cggcggcagaagcagcacctggggctgcgcttcgactcactgtacagcatcctggaggag
cggaagaaggagctgctgcagagcatcgcgcgggagcaggagacaaaggtgcagcgtgtg
cggggcctcatccgccagtacggcgaccacctggaggcctcctccaagctggtggagtcg
gctatccaggccatggaggagccccagatggccgtgtacctgcagcactccaaggagctc
ctgaaaaaaatcacggacatgtccaaggtgtcgatgagcagccgcccggagcctggctac
gagaacatggaccacttctccatcaacgtggactatgtggcagagatgctgaggaccatc
gagttccagacagagccgctgggcgaggatgaggcggatggacccggggacggcagcgag
gctgcaggagatgaggaccggctggacagcctggaggtgcccgaagccgtggaggatgtg
gggccgaggcagaagccggcgagctctccccatggtcagcactga
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