Mycteria americana (wood stork): 142408863
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Entry
142408863 CDS
T11228
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142408863 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mame03021
]
142408863 (POLR1A)
Enzymes [BR:
mame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
142408863 (POLR1A)
Transcription machinery [BR:
mame03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
142408863 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
142408863
NCBI-ProteinID:
XP_075355653
LinkDB
All DBs
Position
4:7573970..7613590
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKLITNPQYLDNVGNPAINGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPVTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVILNRFLEQCADATASEIEEELNHHVHEILQSHQIRDHCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYHKSGEEGI
LDEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFSGMDPHESSGFSPDMFFL
DLLVVPPSRYRPINRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEE
IQTETGENNEPLDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQTGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTVRGCFFTREQYMELVYR
GLTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENHIPLNLTGKAKIGGRAWVKA
PANRYPNLDLMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKALTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADYKRQKIIEKSSQCGVEAVRAALNLPETASCEE
VQGKWQDAHLRKDQRDFNMVDVKFKEEVNSYNNEVNKVCMPFGLHRSFPENNLQLMVQSG
AKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPKQFPFIAENYEVIQKTNHLDEALAKMESHQANQQFKAIKKWRARHQN
TVQREGGFLLFSQKKMASVKARIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNK
CPDPSLGVWRPDTYFASVSETFENGVEDYINKWESENRRSCMSLALPSDRLKDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PTMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLHVKCKQNKHHLYKVKFHF
LPHEYYREEKCVKPREILHFMETRFFKIFLEAIKRKNAKMTSFTEVSTRKATRKDVDGDH
DKIQNNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEESIDENLE
DEEAESEKEEKTPGAEDQIGADDDESQHLSFMSQTKKEKARLLQSAELRVNAVLDSHPSI
QDYVFDTENELWCEVSLALPLMKVHFDLSSLLVSLARSTVIHEVKGITRCLLNESTNKQG
EKELVLQTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaagtagtgccatggcggcggctggttggggtctccttcgggatgtac
acggccgaggagatcaggaagctgagtgtaaaactcataacaaatcctcagtatttggat
aatgtgggaaatccagccattaacggactgtacgacttggctttgggacctccagactcc
aaagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggccattttggccat
atagaactgcctgtgactgtctacaaccccctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactg
ctaagtcagctgaaggttctggaaaaagggttacttcatgccgtccacgatcttgaagtc
attctgaacaggtttttagagcaatgtgcagatgcaacagcttcagaaattgaagaagag
ttaaatcaccatgttcatgaaatattacaaagtcatcaaataagagatcactgttcaaat
gtaaaaaatgtatgcgagtgtagaaataaactgatagcacagttctggaaagcacatatg
agttcaaagaaatgcccgaactgcaaatctaggagatcactagtgcgaaaagagcataac
agcaagctgacagtaacctatccttctacagtgtaccataagtcaggagaggaaggcatc
ctggatgagccagcagctattgatgagagccagttagggaagagaggatacctgacacca
atgactgccaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttat
ctcttctctgggatggatccccatgagagttcgggattcagtccagacatgtttttttta
gatctacttgtggttccaccttcaaggtatcgtcccataaatcgtgttggagaccgactg
tttacaaatggtcagacagtgaacttgcaggctgtcatgaaagacgccaaaatgatccgg
aagctcttggttttcatggcaaaagaacaatgtcagccaataaaaattgcagaagaagaa
atccaaacagagacaggagagaataatgaacctctggaccattctgtcctgacaatgatt
ccaggacagaccattgcagataagctgtacaacgcttggattcgtcttcagagccatgtc
aacattgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgt
cagctattagagaaaaaggaaggattgttccgcaagcacatgatgggaaagcgcgtggat
tttgctgctcgatcagtcatttgccccgatatgtacattggtaccaatgagattggcatt
cctatggtatttgctaccaaactgacttaccctcagccagtcactccctggaatgtcaaa
gagctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcatt
aatgaagatggatctcgtacagtgttgagtgcaagcagcctgacccagagggaagccata
gctaagcagctcctcactccttcttcaggcgcgccccagacaggactgaagattgtatgt
cgacatattaaaaatggggacgtccttttactgaaccgtcagcccactcttcatagaccc
tccatccaagctcaccgggcccgaatcctgcctggagaaaaagtgctgaggcttcactat
gccaactgcaaggcttacaatgctgattttgacggtgatgaaatgaacgcccattttcca
cagagtgagctgggtagagcagaagcctacaccttagcctttactgatgaacagtatctg
gttccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtt
agcatgacagtccggggctgctttttcaccagagaacaatatatggagcttgtttaccga
ggactaacagacaaaaaaggaagaattaaaatctttcctcctgccattatgaaaccacag
cgattatggacaggaaagcaggttgtttctacattgttaataaacataattccagaaaac
cacatcccactgaatttgactgggaaagctaagattggtggaagagcctgggtaaaggca
cctgcaaacagatatccaaatcttgatttaatgtgtgaatctcaggttattattagaaat
ggggaattactgtgtggtgtcttggacaaagctcactttggcagctctgcctatggcctg
gtccattgttgctatgaaatctatgggggtgaaaccagtgggaaagcactaacatgtcta
ggacgcctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagat
attttggttaaacctgaagcagactacaaaagacaaaaaataattgaaaagtcaagccag
tgtggtgttgaagctgttagagctgctcttaatttgccagaaacagcatcatgtgaggag
gttcaagggaaatggcaggatgcccatctccgcaaagaccagagggattttaacatggtt
gatgtgaaattcaaggaggaagtaaacagttacaacaatgaagttaacaaggtttgtatg
ccctttggtctccacaggagcttcccagagaacaatttgcaattgatggtacagtcagga
gccaaaggatccactgtaaatacaatgcagatttcttgtttgctgggccagattgagttg
gaagggcgaagacccccactgatggcatctggcaaatcgctgccatgtttccagccttat
gatttttcccctagttcaggaggatttgtgactggaagatttctcactgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtctcgtggacacagctgtcaaa
accagccgttctgggtacctacaaaggtgtatcataaagcatttggaaggactggtagtt
cagtatgatctgactgtacgagatagtgatggcagtgtggtgcagtttctgtatggagaa
gatgggcttgatatccctaaaactcagttcttacaacccaagcagtttcctttcattgca
gaaaactatgaggtaatccagaagacaaaccatctggatgaagctttagcaaagatggag
tctcaccaagctaaccagcagttcaaagccattaaaaagtggcgagcccggcaccaaaac
actgtgcaaagagaaggaggttttctgttgttttcccaaaagaaaatggcaagtgtaaaa
gcacggattccaggaggagaaatcaaaaatggaagagatcctgctactttacagttattg
aagatgtggtatgaactagatgagaagaaacggagaaagtatctgaagaagacaaataag
tgtcctgacccaagccttggtgtttggcgtccagatacttattttgcgtctgtttcagaa
acatttgaaaatggagtcgaagattatatcaacaaatgggaatctgagaacagacgaagc
tgtatgagcctagcgcttccttctgatagattaaaggatttgttgtatttaaagtggcag
cgatctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaa
ccttccacccagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtc
acattgggtattccaaggttgcgggaaatattgatggtagccagtgcaaatattaaaacg
ccaaccatgagtgttcctgtgttcaataccaagaaagctctcaagaaggtgaaacagctt
aagaaacagctcacaagagtgtgcttagctgaggtcttgcagaaggttgagatagaggaa
tccctgcatgtgaagtgcaagcagaacaaacatcacctctacaaagtcaaattccatttc
ttgccccatgaatattacagagaggagaagtgtgtgaagcccagggagatcttgcacttc
atggaaacaaggttctttaaaatttttctggaagcaattaaaaggaagaatgcaaagatg
acatcttttactgaagtcagcacccggaaggcaactcggaaagatgtagatggtgaccat
gacaagatacagaataatcaggaggctccagcagaggaagaagagaacattgttgacgca
gaagctgatgaaggggatggcgatgctacagaagcaaaacggagaaagaaccaagaagaa
gaggttgattatgagagtgaagaagagaatggggaagaaagcattgatgagaatctagaa
gatgaagaggctgaatcagaaaaagaagaaaagactcccggtgcagaagatcagatcgga
gcggatgatgatgaatctcaacatctttccttcatgtctcagactaaaaaagagaaagct
cgattacttcagtcagcagaattgcgagtaaatgctgttctggacagccatccctcaata
caggattacgtgtttgacaccgaaaatgaactttggtgtgaggtttcattggcacttcca
ttgatgaaggtgcactttgatctctcctccttgcttgtctctcttgcacgaagcacagtc
attcatgaagtgaaggggatcacacgatgcttgttgaatgaaagtaccaataagcaagga
gagaaggaactcgttctgcagactgaagggataaaccttgcggagctgttcagatactct
gatattttggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgagtctgccctgagggtgattataaaggaaataaaagacgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccgctgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcatgcctagtggttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaacccctcacatag
DBGET
integrated database retrieval system
