Mycteria americana (wood stork): 142408905
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Entry
142408905 CDS
T11228
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142408905 (HTT)
04131 Membrane trafficking [BR:
mame04131
]
142408905 (HTT)
03029 Mitochondrial biogenesis [BR:
mame03029
]
142408905 (HTT)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
142408905 (HTT)
Membrane trafficking [BR:
mame04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
142408905 (HTT)
Mitochondrial biogenesis [BR:
mame03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
142408905 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
142408905
NCBI-ProteinID:
XP_075355758
LinkDB
All DBs
Position
4:11361435..11451202
Genome browser
AA seq
3096 aa
AA seq
DB search
MATMEKLMKAFESLRSFQQQQGPVAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS
LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI
KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPK
IMAAFGNFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV
LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL
IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDESASR
NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDPETRSDVSAASFAASMKGEI
TSELASSSGVSTAGSVGSSAADSTGHDIITEQPRSQHTLQSESVDLTSCDLTSTATEGEE
DDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGT
EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVER
FTSREDAADPGDHENKPSRVKGDIGHYIDGNSAPLVHCVRLLSASFLLTGEKGALVPDRD
VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAVGEEYEEQYVSDILNYIDHGDPQIR
GATAILCGTIVNSILIKSRFDVEKWLINVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL
ACTAVKHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG
KTESLHRGVHHYTGLLKLQERVLNDVVICLLGDEDPRVRHVAAASLLRLVPKLFYNCDQG
QADPVVAVARDQSGVYLKLLMHETQPPSHFAVSTITRTYRGYNMLQSPTDVTMENNLSRV
IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSVGWHCGVSQPSPSDEAQKGCTIG
MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEDSNQGAAKQEEP
WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKASLPSLTNPPSLSPIRRKG
KERESVEQASVPMSPKKSGETSPATRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKA
THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP
TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTH
FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSITSAAKHRADKNAIHNHIRLF
EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG
QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI
VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR
LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS
VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRCGENNLSAPE
DRTDIKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI
HIFKSGMFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN
YTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDSESKRGMCNREIVRRGALILFCD
YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL
AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARVVDTLACRRVEMLLAATL
QNSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG
EDQPALENVILDKDWYVSLVRSQCCIKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSL
LAPCLSLGMNEISRDQKSSFFETARRVTLDNVSTTVQNLPASHQVFQPLLPTEPSAYWKK
LSDIFGDEVMYQSMMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVMSVEALSWHL
MHDQIPLSVDLQAALDCCCLTLQQPSLWNLLASATNVTYACSLINCIRFIIEAVAVEPGN
QLLSPERKKNTSKGLSESEVDSNTQKTKHITAACEMVAEMVECLQTVLALGHKRNSSIPA
FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF
KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEENQQEEDTERTQINVLAVQAI
TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD
NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN
NITPLREEEWGEDEDEENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS
NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPAT
CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII
SEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS
DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM
YTGKEKISPSRTTDANPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD
FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR
TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE
LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC
NT seq
9291 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaagctgatgaaggccttcgagtcgttgcgctccttccagcagcag
cagggtccggttgccatccctgaggagccgctccagagaccaaagaaagaactttcaact
accaagaaagatcgagtgaatcattgcctaacaatatgtgaaaacatagttgctcagtct
ttaagaaattctccagaatttcagaaactgctggggattgctatggaactctttctcctc
tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt
attaaagctttgatggattccaatcttcctaggttacaattagaactgtataaagagatt
aaaaagaatggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgcc
catctagttcggcctcaaaaatgcaggccgtacttagtgaaccttttgccctgtctaaca
cgaataagtaagagacctgaagaatcggtacaagagacactagctgcagcaataccaaaa
atcatggcagcatttggcaattttgcaaacgacaatgagattaaggttttattgaaggct
ttcatagctaatcttaaatccagttcccctactatccgtcgaacagcggcaggatcagca
gtaagcatctgtcaacattcacgaagaatgcagtatttttatgcctggttattgaatgta
cttttaggcttgttggttcctgtagaagatgatcatcctactcttttaattctgggtgtt
ttacttacactaagatatctcatacctttattgcaacaacaagtaaaggataccagcctg
aaaggcagttttggcgtaacaagaaaagaaacagagatttcaccttcaccagaacaacta
atacaggtttatgaattgactctgcattacacccagcatcaggaccataatgttgtgact
ggagctttagagttgttacaacaactctttagaacgccaccacctgaacttctccatgcc
ctgaccgcttcagggggcattgcacaggtcagtgtatccaaagatgaatctgccagcagg
aaccgcagtgggagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt
cttgcgagaaagcataaagggaaaatacttcttggtgaagaagaaggtttggaggatgat
cctgaaacccgatcagatgtcagtgctgcatcatttgcagcttctatgaagggtgagata
accagtgaactagcttcttcatcaggtgtatcaacagctgggtcagtagggagttcagct
gccgattctaccggacatgatatcattaccgagcagccacgttctcaacatacattgcag
tcagaatctgtagacctgacaagctgtgatttgacaagtacagctacggaaggggaagaa
gatgatgtgcttagtcgaagctccagccagatcagtgctgtccagtcagatcccactatg
gacttgaatgatggtacacaggcttcctcaccaattagtgatagctctcagactactaca
gaaggtccagactctgctgtaaccccttcggacagttctgaaattgttttggagggtact
gaaggacagtattctggaatgcaaattgggcagctgcaggatgaggaagatgaggctgca
aatattctccaagatgattcatcggagtctttcagaaattcttctattgctcttcaacag
cctcacctgttgaaaaccatgagccatagtaggcagccttctgatagcagcgtagaaaga
tttacatcaagagaagatgcagcagatcctggtgatcatgaaaataagccctccagggta
aagggagacataggtcactatatcgatggaaattctgctcctttagtacactgcgttaga
cttctgtcagcctcttttctacttactggggagaaaggagctttagttcctgatagagat
gtgagagtcagtgtaaaagccctggcagtaagttgtgttggagcagctgttgcgcttcac
cccgagtctttcttcagcaaactgtataaaacaccccttgaagcagtgggagaagagtat
gaggagcagtatgtatcggatattctgaactacattgaccatggagatccccagattaga
ggagctactgccattctgtgtggaacaattgtcaactccattctaattaaatcccgcttt
gatgtggaaaaatggctaataaatgtcagaagctcaacaggaaatctcttttccttggta
gactgcatacctctgttacagaaaacactgaaagatgagtcctctgttacatgcaaactg
gcttgtacagctgtgaagcattgcatcatgagcttatgtagtagcagttacagtgaacta
ggtttacaattaattgttgacctccttacgctgaagaatagctcatattggctagtaagg
acagaacttctggaaacacttgcagaggtagattttcggctagtcagcttcttggaagga
aaaactgagagcttgcacagaggtgttcatcattatactggtctactgaaacttcaggag
agagtgcttaatgatgtagtaatatgtctgcttggagatgaagatccaagagtgagacat
gtagctgcagcttcattactgaggcttgttccaaagctattttataactgtgatcaagga
caggctgatccagttgtggcagtagcaagagaccaaagcggtgtctacctgaaactacta
atgcatgaaacacagcctccatctcactttgcagttagcactatcaccagaacatataga
ggttacaatatgctgcaaagtccaacagatgtcactatggaaaacaatctctcgagggtt
attgcagcaatttcacatgcattgacaatatccactacaagagcacttacgtttggctgc
tgtgaagctttgtgtcttctctccacaacatttccagtctgcacctggagcgtgggatgg
cactgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgcaccattgga
atggccggcatggtcctgtctctcctttcatcagcatggttcccactggacctctctgca
catcaggatgctttgattttgactggaaacttgcttgcagcaagtgctcccaagtgctta
aagaatccctggagtgctgaagaagattcaaaccaaggtgctgcaaagcaggaggaaccc
tggccggctctggcagatcgaactcttgttactttagtagaacagctcttttctcatctg
ctgaaggtcattaatatttgtgcacatgtaatggatgatgttgctcctggcccagcagta
aaggcatcgttaccttctctcacaaacccaccttctcttagtccaattcggaggaagggg
aaagagagggagtctgtcgaacaggcatctgtgccaatgagccctaaaaagagtggtgaa
acaagtccagctactaggcaaactgatgctactgggcctgttccaacaagtaaatcatct
tcagtaggaagcttttatcatcttccatcatatctgaagttgtacgatgtcttgaaagca
acccatgctaattataaggttactttggatctccagaacagtaatgaaaagtttgggtgt
ttcttacggtctgccttagatgttctgtctcaaatcttggaacttgctactcttcaagac
attggaaagtgtgtagaagaaattttgggatacctaaaatcatgtttcaacagagaacca
acaatggcaacagtttgtgtacagcagttattgaaaacattgtttgggacaaatctggct
tctcagtacgatggcttgtcttcaaaccccaacaaagctcaaggcaaagctcagcgctta
ggttcttctaatttaagacctggtctctatcattattgcttcatggcaccgtacacccat
tttacacaggcccttgctgatgctagtctaaggaacatggttcaggctgaacaggaacat
gatgcttcaggatggtttgatgtgctgcaaaaagtttctacacagctgaaaactagcatt
accagtgcagcaaaacatcgtgctgataagaatgctattcacaatcacattcgtttattt
gaaccccttgtcataaaagcattgaaacaatatactacaacaacatcggtacagctgcag
agacaagttctagacttgcttgctcaactggttcagctacgagttaactactgccttctg
gattcggatcaggtgtttattggatttgtgctaaagcagtttgaatacatcgaagtagga
cagttcagagagtctgaagcaattattcctaatatcttttttttcctggtgttgctgtct
tatgagcggtatcattccaaacagataatcggaattcctaagatcattcagctatgtgat
ggtatcatggccagtgggaggaaagctgttacacatgcaataccagctctgcaacccatc
gttcatgatctcttcgtgttaagaggaacaaataaagctgatgctggaaaagagttggaa
acgcaaaaggaggtggtagtgtcaatgctgctgagacttattcagtaccatcaggtgcta
gaaatgttcatcttagtattgcaacagtgtcataaagaaaacgaagacaaatggaaaaga
ttgtcccggcaaatagctgacattattctcccaatgcttgcaaaacagcagatgcatata
gactctcatgatgctctgggagtattgaacactttgtttgaaattttggctccttcatcc
cttcggcctgtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatca
gtgagcactgtccagctatggatttctggaattttagctatccttagagttctgatttca
cagtcaacagaagacattgttctatcccgtatacaagagctttccttctcaccatatctg
atttcatgtcaagcaattaacagactgagatgtggagaaaataacttatctgcaccagag
gatcgcactgatattaaacaggctaaatatctgcctgaagagacattttctaggttctta
ctacaactggttggcattctactggaagatatagttaccaaacagttgaaagtggacatg
aatgagcagcaacatactttctactgccaggagctgggcacactgcttatgtgcttaata
catatcttcaaatcagggatgtttagaagaatcacagctgcagccaccagactttttaca
ggagatggatctgatggtagtttctatacccttgaaagtttgagtgaccttgttcagtcc
atgattcccacgcatccttctttagttctcctctggtgtcaaatcctgcttcttgtcaat
tatacaaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttct
actactaaattgcttagccctcagatatctggagacagtgatgaatcggattcagaatct
aaacgtggcatgtgcaatagagagatagtgagaagaggagcactcattcttttttgtgac
tatgtttgtcaaaacctgcatgattcagaacacttgacctggcttattgtgaatcatgtt
caggacttgattaatctgtcccatgagcctccagtacaagactttattagtgctgttcac
aggaattccgcagccagtggtctcttcatccaggccattcaatcacggtgtgagaatctt
gcagctcccacaactctgaagaagaccttacagtgcttagagggaatacatctcagccag
tctggggctgttttaacattatatgttgataagcttttgtgtactccattccgtgtgctt
gctcgcgtggttgacacactggcttgccgtcgggtagaaatgcttttggctgcaacttta
cagaacagcattactcagttaccagttgaagaactggatagaattcaggaataccttcaa
aacagtggattagcaacaagacaccaaagactttactcgctcttggatagatttcgtctt
atggtagcaccagacacaactagtccttcacctctggttacctcacacccactagatgga
gaagaccaaccagctttagagaatgtaattctagacaaagactggtatgtgtcactagtg
aggtcgcagtgttgcatcaagtctgactcagcactgctagaaggtgcagagctggtaaat
aggattcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctgagcttg
ttggcaccttgtttaagccttggcatgaatgaaatctcaagagaccagaagagtagcttc
tttgaaacagctcggagggtaactctggataatgtgtctaccactgtacaaaatcttcct
gccagccaccaggtttttcaaccactattgccaactgagccatcagcctactggaaaaaa
ctaagcgatatctttggagatgaggtgatgtatcagtctatgatgacactttgtcgtgca
ctggctcagtatttgttgttgctctcaaaactaccagctggtctccgtgttcctcctgac
aaagaggatgatatcctgaagttcgtagttatgtcagtagaggcactatcatggcattta
atgcatgaccagattccattaagtgtagatcttcaagctgctctggattgttgctgtctg
accttacagcagcctagtctctggaatttgttagcttctgcaactaatgtgacatatgct
tgctccttaattaattgcattagatttatcatagaagcagttgctgttgaacccggtaat
caacttcttagtcctgaaagaaagaagaatacttcaaaaggcttaagcgagagtgaagtt
gattcaaacacacagaaaactaaacacattactgcagcttgtgaaatggtagctgagatg
gtggaatgcttacagactgtcttggcactggggcacaaaagaaacagcagtatcccagca
tttcttactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaac
agttacacaagagtacctcccttggtctggaaattaggctggtcaccaaagcctgcaggt
gacttcggcacagtttttcctgaaatcccagtagaatttcttcaagaaaaagaaatcttt
aaggagttcatctatcgcattaatacacttggatggatcagccgtactcagtttgaagag
acttgggctacattgcttggtgtgcttgtaactcagcctattgtaatggaccaagaggag
aaccaacaagaggaagatacagagaggacccaaattaatgttctcgcagtacaagccata
acttccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagttagctgt
ttggaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttgggaggaag
ctaagtgtcatcaggggtattgttgaacaggaaatccaagcaatggtatctaagagagat
aatattgctactcatcacttataccaagcttgggaccctgttccatcactttctcctgct
actacaggggctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaa
ataggagatatggattataaactgggacaggtctccatacactccatatggttaggaaat
aatatcactccactgagagaagaagagtggggtgaggatgaagatgaggagaatgacata
cctgctccttcctcaccaccaacttctcctattaacaccaggaagcaccgggctggtgta
gatatacattcttgttctcagttcttgcttgaactgtatagtcagtggatattgccatca
aatcccagcaagagaacgccagtcattttgattagtgaagtggtgcgatcacttctggca
gtatcagacttatttacagaaaggaatcagttcgagatgatgtatacaacattgacagaa
ttgcgaaaggtgcatccatcagaagatgagattcttgtacagtatttgataccagccact
tgtaaagctgctgctgtacttggaatggataaagctgtggctgaaccagtaagtcgactg
ctggaatcaaccctaagaagcacccatatgccaagtcggattggagctctgcatggaatt
ctttatatccttgagtgtgacttgcttgatgagacagcaaagcaactcattccaattatc
agcgagtatctgctctccaatttgagaggagtagcacattgtgtgaatatacataaccaa
cagcacatcctggtaatgtgtgcagctgctttctatttgatcgagaattacccacttgat
gtagggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagt
gatgaatcaacgccatccattatttatcattgtgtcctgagaggattagaacgactcctt
ctttcagagcaactttctaggctggatagtgaatcactagttaaactgagtgttgacaga
gtgaatgtgcagagcccccacagggcaatggcagcacttggattaatgctgacctgcatg
tacacaggaaaggaaaaaatcagccccagtcgtaccacagatgcaaatcctgctgctcct
gacagtgaatctgtgatcgtagctatggaacgagtatctgtcctttttgataggatcagg
aagggatttccttttgaagctagagtagtggctcgaatccttccacagttccttgatgat
tttttcccccctcaagatgtaatgaataaagttattggagaatttttatccaatcagcag
ccttacccacaattcatggcaacagtagtttataaggtattccagacgctacatagcact
ggacagtcctcaatggtccgtgactgggtgatgctgtctctctctaatttcacacaaaga
acacctgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttccaccagt
caatggatttcagcaattcttccacatattatcagcagaatgggaaaatcagagcaagtg
gatgttaacatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaa
ctagatcggagggcctttcagtcagtgtttgaggtggtagcatctccaggaaccccatat
catcgcttactaacttgtttgcaaaatgtccacaaggtcacagcatgttga
DBGET
integrated database retrieval system
