Mycteria americana (wood stork): 142408977
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Entry
142408977 CDS
T11228
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142408977 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mame03041
]
142408977 (DHX15)
03009 Ribosome biogenesis [BR:
mame03009
]
142408977 (DHX15)
Enzymes [BR:
mame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142408977 (DHX15)
Spliceosome [BR:
mame03041
]
Complex A
U2 snRNP components
U2 related factors
142408977 (DHX15)
Complex B
142408977 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
142408977 (DHX15)
Ribosome biogenesis [BR:
mame03009
]
Eukaryotic type
90S particles
Helicases
142408977 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Cas3-like_C_2
AAA_29
Flavi_DEAD
Atrophin-1
AAA_25
Motif
Other DBs
NCBI-GeneID:
142408977
NCBI-ProteinID:
XP_075355971
LinkDB
All DBs
Position
4:complement(21120220..21169480)
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYAAAGLPTIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgtctagatctgggggacgattacagctccagcaagaaacgcacc
accgatgggaaagatcgtgaccgggacagggaccgtgatgaccgttctaaagatcgcgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggaaaaagatttgcga
cctacgtctaactctacgtattatgcagcagctggcttaccaactataaaaccagcaatg
attccacatagtattaaccctttcacaaatctaccacatacaccacgatattatgacatc
ctgaaaaaaaggttacaacttcctgtctgggaatataaagaaagatttacggatattttg
attaggcatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcagtggtgtgttgactacatgcgctcactgcctggtccaaagaggggagtagcatgt
acccagcctaggagagtagctgcaatgagtgtggcacagcgtgttgctgatgagatggat
gtcatgctgggccaggaggttggttactcaattcgatttgaagactgcagtagtgcaaaa
accattttgaaatatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctatggtgttataattcttgatgaggctcatgagaggacactggctacagat
attttgatgggagttttgaaggaagttgtaagacaaagatctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actataccgggtcgcacccatcctgtggagatattctatactccagaaccagaaagggac
taccttgaggctgccattcgaacagtgatccaaattcacatgtgtgaagaagaggaagga
gatctcttactttttcttactggtcaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgatttaggccctgaagttggtgacatcaaaatcattccactgtattcc
acccttcctccgcagcaacagcaaaggatttttgaacctcccccaccaaaaaagcaaaat
ggggcaataggaagaaaggtggttgtgtccactaatattgctgagacatcattaacaata
gatggtgttgtgtttgtgattgatcctggctttgcaaaacagaaggtatacaatcctcgt
atcagagtggagtctctcttggtgactgcgattagcaaagcttctgctcagcagcgagct
ggccgtgctggtcgtactagaccaggcaagtgcttcaggctttatacagagaaggcttac
aaaactgaaatgcaggacaacacataccctgaaattttgaggtctaacttaggatctgta
gtattgcagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatccatgatggctgaatttccattggacccacaa
ctggctaaaatggttattgcaagttgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagactttaccagccgagactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggaacgaacagggcattac
ttaactgtaaaagataaccaggtggtgcagttgcatccttccactgttcttgatcataaa
ccagaatgggtgctctataatgagtttgtccttacaacaaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgtgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcgcagtactga
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