Mycteria americana (wood stork): 142410343
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Entry
142410343 CDS
T11228
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
mame Mycteria americana (wood stork)
Pathway
mame04140
Autophagy - animal
mame04148
Efferocytosis
mame05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142410343 (VPS18)
04148 Efferocytosis
142410343 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142410343 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mame04131
]
142410343 (VPS18)
Membrane trafficking [BR:
mame04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
142410343 (VPS18)
Hops complex
142410343 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING_UBOX
Lact-deh-memb
zf-RING_2
zf_RING_Vps8
Nup54_57_C
LETM1_C
DUF5600
STX17_N
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
142410343
NCBI-ProteinID:
XP_075358836
LinkDB
All DBs
Position
5:31124648..31140479
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDEQVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSSL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDLLLSYLEQAGTNPNRIHYDLKYALRLCAEHQHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTTSLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatcctggacgagtacgaagattccctctaccgctccgcctccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacaccctgctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcgctctcccgctggaaaggccac
ttgattgaaagcgtgggttggaacaaatttcttggttcagagaccaacactgggcctatc
ctggtggggacagcccagggtcagatctatgaggctgaaatctctgtcagcgagggaagt
ctcttcagcactaatcctgaccagtacttccgacaggtctacactctggaggaggaatca
ggacctgccccagtctgctgcttggagattgaacgagggatagaagggaaattttttatt
atagccaccactcgaaagagactcttccagtttgttggcaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccggccagctttggttttagtgagatagccttttatactccaaaactgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacattggattatagc
cgtcctgattcaattttaagtgatgaacaggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagttccacttcctgttgctgctgcct
gatcgggtgaaggctgtatgcactctgaatgggcaggttgtttttcaagatctgttcctg
gagaagtttggcttactgacacgcatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccacgtccagcgggaatctagagatgtgtggaaa
atgtatatgaatatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagag
tgcctagatattgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtatcta
gacagtgccaaatgctatgcactgacccagaactactttgaggaaattgcccttaagttc
atcgaagccaagcaagaagaggccttgatggagtttctgattaagaagctaagtagccta
aagccttctgagaagacacagacaactctgctgaccacatggttaacagagctgtacctg
aactggctaggtatattggaaggagatccctcacagcgaaatctctatttggatacacga
gagaagtttcgcactttcctgagcagtcccaaaaacaaagactgtctatttaataaccgg
gcatctatttatgagttgttggcaagccatggggacacagagcacatggtctactttgca
gtcatcatgcaggactacgagcgtgtagtggctcaccactgccagcatgatgagtatgat
gaagctctaaatgtgctgtccaggcacagagatgagaagctgttctataagttctctcca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggctctaga
ctggatgccaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggccggacttgctgcta
tcatacctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgca
ttgcgcctgtgtgccgagcatcagcaccaccatgcatgtgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatctcgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctactgaagattgaagatgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaattcgagaggacatccaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcactatgactgtctcctc
caagcagttttcccaaaccttcctgcctataagcaggcaaaacttgaagatcttcagaag
aagctggcagctaccagtcagccttccaagagccaccatcgtcccaaggacgcagatacc
actagcttggggaaggggcagcagagccgggaacagatcaaagctgacattgatgacatt
gtggcagctgaatgtgtgtactgtggtgagctgatgatccggtccattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
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