KEGG   Mycteria americana (wood stork): 142410594
Entry
142410594         CDS       T11228                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
mame  Mycteria americana (wood stork)
Pathway
mame03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mame00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142410594 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mame03400]
    142410594 (TDP1)
DNA repair and recombination proteins [BR:mame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     142410594 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 142410594
NCBI-ProteinID: XP_075359537
LinkDB
Position
5:54851941..54903873
AA seq 607 aa
MLQEGAHGKWTVSSSDESTEENSDSEKPSTSSLLDAARGRTSGPQYPCSEARKAAHKRKA
SPLKLSDKKISTKIPPAEKQRTSQEGLGWCLSSSDEEPEDQEKHAHKETLKEEKCDAPKE
HPLNLCKDDELSENRKAEEYDETSSEAQDTWDLLNGGNPFRFFLTKVRGIEQSYNSGALH
IKDILSPLFGTLISSAQFNYCIDVGWLVRQYPQEFRKKPLLIVHGEKRESKAELLAQARP
YENISFCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIAEDWHQKTQGIWLSPLYPR
LPQGTTGSAGESETNFKSDLISYLVAYNSPTLKEWIDLIQEHDLSETRVYLLGSTPGRYQ
GSDKEKWGHLRLRKLLKEHASSVPAKESWPVVGQFSSIGSMGADGSKWLCSEFQESLVAA
GSSVTTLLKCDVPIHLVYPTVNNVRQSLEGYPAGGSLPYSIQTAQKQLWLHSYFHKWSAE
ISGRSHAIPHIKTYMRPSPDFQKIAWFLVTSANLSKAAWGALEKNGTQLMIRSYELGVLF
MPSAFGLDKGYFHVRGKLLSESNDSATYFPVPYDLPPEQYGSKDQPWIWNIPYTNAPDTH
GNMWVPS
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgcttcaggaaggtgcacacggcaaatggacagtatctagcagtgatgaaagtactgag
gaaaattctgacagtgaaaaaccgtctacatcttcactattggatgctgcacgtggcaga
acaagtgggccccaatatccatgctctgaagctaggaaagctgctcacaagagaaaggct
tctcccctgaagctcagtgataaaaaaatttctacaaaaatacctccagcagaaaaacag
agaactagccaagaaggcttaggctggtgtctttctagtagcgatgaagagcctgaagat
caggaaaagcatgcccacaaagaaacactgaaagaagaaaaatgtgatgcacccaaagaa
caccctctgaatctttgcaaagatgatgaactctcagagaatcggaaagcagaggagtat
gatgaaacatccagtgaagcccaagatacctgggatctgttgaatggaggaaaccctttc
aggttttttctcacgaaagtcagaggaattgaacagagctataattctggagccctgcac
ataaaagatattttgtctcctctttttgggactctaatatcttctgcccagtttaactac
tgtatagatgtggggtggcttgtaagacagtatccgcaggaattcaggaagaagccattg
ttgatagttcatggtgaaaagagagaatccaaagctgaactgcttgctcaagcacgccct
tatgagaacattagcttttgtcaggctaaactggatattgcatttggaactcaccatacg
aaaatgatgttgttgttatatgaagaaggtcttcgagttgtgatacatacatccaacctt
attgctgaagattggcaccagaaaactcagggaatatggctaagccctttatatccaagg
ctacctcagggaacaactggttctgctggtgaatctgaaactaattttaaatctgacctt
ataagttacttggtggcttacaattctcctacgctcaaggaatggatagatctgattcaa
gaacatgatttatcagagacaagagtgtatctgcttggttctacccctggacgatatcaa
ggtagtgataaagaaaagtggggtcatcttaggctcagaaagcttttgaaagagcatgct
tcatcagtaccagcaaaggaatcctggcctgttgttggacagttctcaagcattggttca
atgggagctgatgggtccaaatggctgtgctctgagttccaggagagcctggtggctgca
ggcagcagtgtgacaactctccttaaatgtgatgttccaattcatttggtttatcctact
gtgaacaatgtgaggcaaagtctggaaggctatcctgctggtggctcgcttccgtacagt
atacagacagcacagaaacagctgtggttgcattcctattttcacaagtggtcagcagaa
atctcaggtcgaagtcatgctatacctcacattaagacatacatgagaccctctcctgac
ttccagaagattgcatggttcttagttacaagtgccaacctatctaaagcagcttgggga
gctctggagaaaaatggtacgcaactgatgatccgttcttacgaacttggagtccttttc
atgccttcagcatttgggttggacaaaggttactttcacgtgagagggaaactgctttca
gaaagtaatgattcagcaacgtattttcctgtaccttatgacctgccaccagaacagtac
ggaagcaaagatcaaccatggatttggaatattccttacactaacgcccctgatacacat
ggaaatatgtgggttccatcgtga

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