Mycteria americana (wood stork): 142411174
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Entry
142411174 CDS
T11228
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mame Mycteria americana (wood stork)
Pathway
mame03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142411174 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mame03021
]
142411174 (TAF5)
03036 Chromosome and associated proteins [BR:
mame03036
]
142411174 (TAF5)
Transcription machinery [BR:
mame03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142411174 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
142411174 (TAF5)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
142411174 (TAF5)
STAGA complex
142411174 (TAF5)
TFTC complex
142411174 (TAF5)
SAGA complex
142411174 (TAF5)
SLIK complex
142411174 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_RIG_2nd
Beta-prop_SCAP
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ASA1
Beta-prop_SPT8
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
DNAI3_WD
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
142411174
NCBI-ProteinID:
XP_075360740
LinkDB
All DBs
Position
6:complement(15163287..15175537)
Genome browser
AA seq
787 aa
AA seq
DB search
MAALPEEPAEVAAVKPDPEAGTPPQPPAAPPAAAAAPAAPPAAAAEGEAAGSGGEAAPPK
PAAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAALSPAGAGL
LGVPGGDADSAGGEALLSRVTTAAAIAIGGSAATVASSSPGVAAVAAVPPGKVGGGVVVE
DQPDVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVY
NQHESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVF
FGLLKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPNAPPQNRIPLPELK
DSDKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADST
VRVWSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSP
DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIH
SLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDN
TVRLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLA
AGAYSSQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactacctgaggagccggcggaggtggcggcggtaaagccggaccctgaggcg
gggacgccgccgcagccccctgctgctcctccagccgctgccgccgctcccgccgctccc
ccagccgcggcggcggagggggaggcggcggggagcggtggggaggcggcgccccctaag
cctgcggcaccgggcccggccgcctccccggcggcgctggaccggcagacgctcgtggcc
gtgctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctgcgccgcgaa
gcccgcctgctcggcgacgacctcggcgctgctgccctcagccccgccggcgccgggctt
ctgggagtcccgggcggcgatgcggactccgccggcggcgaggcgctgctcagccgggtc
accaccgctgccgccatcgcgataggaggcagcgccgccactgtcgcctcttccagcccc
ggggtggcggcggtcgccgccgtgccgccggggaaagttggaggaggcgttgtcgtggaa
gatcagccagatgtgagtgcagtattgtctgcctacaatcaacagggggacccgacgctg
tacgaggaatactacagtggattaaaacacttcattgagtgttccctggactgtcatcga
gcagaattgtctcagctgttttatcctctctttgtgcacatgtacttggaattggtctac
aatcaacatgagagtgaagcaaagtctttttttgaaagatttcatggggatcaggagtgc
tattaccaggatgacctgcgtgtattatctagcttaaccaaaaaagaacatatgaaaggt
aacgagaccatgctggatttccgaacaagcaagtttgtgctgcgtatttcccgtgactct
taccaactcttgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgtt
caggaacatctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagat
gctatggttggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttc
tttggcttactgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaagga
gaaaatgaggaaggaaagccaaagaagaaaaaacctaaaaaagatagtgtagggtcaaaa
agtaaaaaacaagaccctaatgctcctccccaaaacagaattcctctgcctgaactgaaa
gactctgacaagctggataaagtaatgaatatgaaggaagctgcaaggcgtgtgcgtctt
ggcccagagtgcctaccctccatctgtttctacacgttccttaatgcttaccagggtctg
actgcggtggatattacagatgactctagcatgattgtaggaggctttgctgactctact
gtcagagtgtggtctgtgactccgaaaaagctacgtagtgtgaaaacagcagcagacctc
agtctcatcgacaaagaatcagacgatgtcttggagaggatcatggatgagaaaacagca
agtgagttgaagattttgtatggtcacagtggacctgtctatggcaccagcttcagtcct
gataggaattatctgttgtcctgttctgaggatggcactgtcagattgtggagtctccaa
acgttcacgtgtttggtgggatataaaggacacaactatccagtatgggatacacagttc
tctccttatggttattactttgtgtcagggggacatgacagagtggctcgtctgtgggca
acggatcactaccaacctttacggatatttgctggccatcttgctgatgtgacgtgtacc
cgatttcatccgaactccaactatattgccacaggctcggcagacaggactatacggctc
tgggatgttttgaatgggaattgtgtaagaatattcactggacataagggaccaattcat
tcattggcattttctcctaatggacgattcctggctactggagcgacagatggaagagtt
ctgctgtgggatattggacatggcttgatggttggagaattgaaagggcacactgacact
atctacgcgctcagattcagtagagatggggagattttagcatcaggttcaatggataac
acagttcgtctgtgggatgctgtgaaggcatttgaagatttagaaaccgatgactttacg
acagccactggacatataaacttgcctgaaaactcacaagacttgttactaggtacatac
atgaccaaatcaaccccggttgtacacctccattttacacgcagaaacttgctgctggct
gcgggagcctacagttcacagtaa
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