Mycteria americana (wood stork): 142411390
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Entry
142411390 CDS
T11228
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mame Mycteria americana (wood stork)
Pathway
mame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142411390 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mame04990
]
142411390 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
mame04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
142411390 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
142411390
NCBI-ProteinID:
XP_075361361
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All DBs
Position
6:complement(32014079..32149461)
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AA seq
699 aa
AA seq
DB search
MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKVITNTAANTEFTE
RFNPNVLKDSALSTHKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGGE
FASTLPIKDPHIDSASPVYQAVLKTQNKPEDETEDWSRRSANLQSRSFRILAQMTGTEYM
QDPDEEALRRSRGKENFAAASENRPTATTHAPQYVTSSIWHPPKSCTMDANTDNAKPVAS
KGSVRLGAGTSQREASFTASGQKVPLTSSSNPSTPVEHAPVSTSSASAPAPHASAHQPAT
AAQSTASLMTPPATTSVVQESFSSSFQRNTSQSYTPMPVSGSYGESPAASATSKPRVVTT
ASIKPSVYQPAPAPVHSYAPASTEPASRPPWVTDDSFSQKFAPGKTTTTVTKHILPRGAP
VPSPASTSAYPSPVSTSSQAPAIARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGR
SWHPEEFNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQT
WHTSCFVCAACKKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGH
TWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagcgtgactctgaatggacctggaccatggggtttccgactgcaagggggc
aaggacttcaacatgcccttgaccatctccagaatcacccctggcagcaaggcagcacag
tcacagatgaaccaaggagaccttgtggtagccattgatggagtcaacactgacagcatg
acccacttagaggcccagaacaagatcaagtcagccagccacaacttaagcctcactctt
cagaaatctaaacgtccagtgccggtttcaaccacagcacccagaattgactctcccagg
gctgtaattccccaccagaaggtcataaccaacaccgctgccaacacggagttcacggag
cgtttcaaccccaatgtcctgaaggactctgccctgtctacgcacaaacccattgaggtg
aaaggcctaggcggcaaggctactataattcacgcccagtataacaccccgatcagcatg
tattcccaagatgctatcatggatgcaattgcaggccaggcacaagcccagggtggagaa
tttgctagtaccctgcctattaaagatcctcacatagacagtgcctctccggtgtatcag
gctgtgcttaaaactcagaacaagcctgaggatgaaaccgaagactggagtcgccgttct
gccaatctgcagtctaggtctttccgcatccttgcccagatgactggaacggagtacatg
caagatccagatgaagaagccctgaggaggtcaagaggcaaggaaaattttgcagcagca
tcagaaaacaggcctacagctactacacatgcgccacagtatgtgacctcaagtatttgg
catcctcctaaatcatgcaccatggatgccaacactgacaatgctaagccagtggcctcc
aaggggtctgtgaggcttggagcgggtacaagtcagagggaggccagtttcaccgctagt
ggccagaaagtccctcttacttcatccagtaatccaagtacccctgttgagcatgctccg
gtgtctaccagttctgcctctgctcctgcaccacatgcttcagcacatcagcctgctact
gctgctcaaagtacagccagtctgatgacaccaccagcaaccacctcagtagtgcaagag
tctttctcgtcctccttccaaagaaacacaagccagtcatatacaccaatgccagtttct
ggaagctacggcgaaagtcctgcagcttctgctacttcaaaaccgagagttgttactact
gccagcataaagccctctgtctaccagccagcgccagcaccagttcattcctacgcccct
gccagcactgagcctgcaagtcgccctccctgggtaacagatgactccttttcccagaaa
tttgcacctggaaaaaccaccaccactgtcacaaagcacatcctaccaaggggtgctccc
gtaccatctcctgcctcaacttctgcttacccatctccagtgtcaacttcttcccaggct
cctgcaatagcccggggaacagttcagagggctgagcgttttccagccagcagccgaact
cctctctgtgggcactgtaacagcataattcggggtcctttcctggtggccatgggtcgc
tcttggcacccagaagaattcaattgtgcttactgcaagacatccttggctgatatgtgc
tttgtggaagagcagaatagtgtgtactgtgagcgctgttatgaacagttctttgcacca
acctgtgcaagatgccacactaagatcatgggggaagtgatgcatgccctaagacagact
tggcacacaagttgctttgtctgtgctgcttgtaagaagccatttgggaatagcctcttt
cacatggaggatggggaaccttactgtgagaaagattatattgctttgttcagcacaaaa
tgccatggctgtgattttcctgttgaagctggagataaattcattgaagctcttggacac
acttggcatgatacctgcttcatttgtgctgtatgccatgtgaatttggaaggtcagcca
ttctactccaagaaggataagccactgtgcaagaagcatgcccatgccatcaatgtttaa
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