Mycteria americana (wood stork): 142411440
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Entry
142411440 CDS
T11228
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mame00536
]
142411440 (COL13A1)
Glycosaminoglycan binding proteins [BR:
mame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142411440 (COL13A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
142411440
NCBI-ProteinID:
XP_075361480
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All DBs
Position
6:38012167..38074248
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AA seq
601 aa
AA seq
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MGIPGRPGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQK
GEMGAAGPRGQPGPPGQKGEKGQCAEYPHREYLSTTLAALRSNQILTLKGEQGQAGIQGP
PGPPGPPGPTGPAGPEGTPGQPGPVGPPGRAGEPGKPGRDGKGLPGPPGPKGDPGIQGYP
GRKGAPGMATAGMKGEPGTPGEKGEKGRAGDPGLPGLPGMKGEKGNAENALAGGKGEPGP
PGLPGPPGPKGEAGDVGRPGAAGSRGEKGEPGSPGDQGPMGPRGPKGEPGKDEMMDYDGN
ISEALQEIRTLALMGPPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPG
PHGLPGKDGPPGIKGEPGHIGVTGEKGDKGEPGQAGSPGLDGPTGEKGERGDQGMPGPSG
LPGPIGLPGLTGEKGEPGERGDKGNPGESISGPPGPQGPPGPPGLQGLPGPKGEAGIDGM
KGEKGAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVSGPAGPKGERGSKGDPGVVGP
MGPAGLPGLQGLPGDKGIRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWN
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctgggcggccgggactaaaagggcaacccggagagaagggtgctccagga
gaagcaggcatgtctatcattgggccccgcggtccacccggacagcctggaacaagaggt
tttcctggattcccgggccctattggcttggacggcaaaccgggtcatcctggacagaag
ggggagatgggtgctgcaggtcccaggggacaacctggacccccaggacaaaaaggagaa
aagggtcagtgtgcagagtacccgcacagggaatacctaagtaccacccttgcagccctg
cgctctaaccagatccttacactaaagggtgaacaaggacaagcgggaatccaaggtccc
ccagggccccctggcccgccagggcccactggaccggctggacccgaaggaaccccagga
cagcccgggccagttgggccacctggcagagcaggagaacctgggaagcctggcagagat
ggaaagggcttacctgggcctcctggaccaaagggagaccctgggattcagggataccct
ggcagaaagggtgctcctgggatggccaccgcagggatgaagggcgagcctgggactcca
ggagaaaagggtgagaagggacgagctggtgaccctgggcttcctggactccctggcatg
aagggggagaagggaaatgctgagaatgccctggcgggaggtaaaggagaacctggccct
ccaggtctgcccgggccccctggaccaaagggagaagctggtgacgttggccggcctggt
gctgcagggtcacggggggaaaagggggaacctggttcaccgggagaccagggacccatg
ggcccaaggggccccaaaggagagcctgggaaggatgaaatgatggactacgatggtaac
atcagtgaagctctccaggaaatacgaactttggccttgatgggacccccaggacttcca
ggtgtggctggacctccagggccaccaggacagaagggtgaaattggcttgccaggtcct
ccaggccatgatggagaaaagggaccacgtggcaagcctggagaaatgggcccccctggc
ccgcatggactgccaggaaaggatggaccacctggaataaagggagagccaggccatatc
ggggtcacaggagaaaagggcgataaaggagagccaggacaagccggctcaccaggtctt
gatggccccactggagagaagggcgaacgaggtgaccaagggatgccaggaccatcagga
ttgccaggtcccattggacttccaggattgacaggagagaagggcgagcccggggagcgt
ggagacaaaggaaatccgggagaatcgatatctggaccccctggaccccaaggcccacca
ggacctccaggtcttcagggcctcccaggaccgaagggggaagcggggattgatggaatg
aaaggagagaagggtgcccagggtgaaaaaggagacagagggccactgggattacccggt
gcttcaggtttagacggcaggcctggaccaccgggtactccaggaccaattggggtttcg
ggaccagcaggaccaaaaggagaaaggggcagtaaaggagatcctggagttgtaggacca
atggggccagcaggacttcctggtttacaaggtctacctggtgacaaaggaatccggggg
gagaggggcaagaaaggctctagagggtctaaaggggataagggagaccaaggagcgcct
ggattagatgcaccctgtccgttgggggaagacggccttccagttcaaggctgctggaat
aagtga
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