Mycteria americana (wood stork): 142412500
Help
Entry
142412500 CDS
T11228
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mame03000
]
142412500 (RC3H1)
04121 Ubiquitin system [BR:
mame04121
]
142412500 (RC3H1)
Transcription factors [BR:
mame03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
142412500 (RC3H1)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142412500 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
142412500
NCBI-ProteinID:
XP_075363975
LinkDB
All DBs
Position
7:complement(37575660..37638975)
Genome browser
AA seq
1130 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYENALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPARAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHISQIRPSCHRPHPSLDELHRRRNEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EIFVFVQYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANV
DSKAMRDQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQG
ATTKSIISDYNPYGTHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAERE
QQLRMELQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQ
LSLELHQVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLESQSKVPTEDLALTFS
SDVPNGSALTQENIGLLSNKTASLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
ttcgacgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacggac
attgaactccttcctgtgaactcagccttgctgcagctagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattagcattgtaccttaaaccactcagcagcgcgagaggtgtgggt
cttaacagtactactcagagcgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcattgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtcg
ctgggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcaacagctctct
tccaacctctgggctgcagtgagagccagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctgctggctctggaagatggatcggctttgtcacgaaag
gtcttggttctctttgtggttcagagactggagccgcgatttcctcaggcttctaaaact
agcattgggcatgttgttcagcttctttacagagcctcgtgcttcaaggtgacaaagcga
gatgaagattcctccctgatgcaactgaaggaggaatttcggacgtacgaagctctgaga
agggaacatgattcccagatagttcaaattgctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatacggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggagttaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacctagagctcctg
gcaaatattgatcccagtccagatgctccacctccaacatgggaacaactggaaaatgga
ctcgttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatatatgtgtcga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcagaggaa
gggggagtggacttgcccaataggaaaacttctgctctgccaaatggaattgtgtcaaca
ggcagcacagtgacgcaacttatttcccgagggactgactccggttacgaaaatgctctg
aagccagggaagatggatcatctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctgtcccgaagagctctatttctgccttaccagtgaaccctcatcctgtgcccgct
cgggcaccaacagatctgccttcagtgtctgtcaccaagcagttgcagatggtaccacga
gggtctcagttgtataatactcagcaagcagatatgttttatcaagatcctagaggagct
gccccaccatttgagccagcgccctaccagcaaggagtttactatcccactcagtccatg
tctcgctttgtccgacctcctccatcagctcctgaacctggtccgccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccgcagcagtat
cctcctatgggacaacctatatacccaccacactacgacagccgtcgtgtatatccccct
gtccagccatatcagcgagaggagattgtccgaggaagccctgtacccattgaaattcca
caagcagctgtaccttcctacgtacctgaatccagagacagataccagcaaacagagggt
tattgcccagtggctcctcatatcagtcagatcagaccttcatgccacaggccgcatccc
agcctggatgaacttcaccgacgaaggaatgagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcaccgtcaccaaccttgcctcatccttttcattcggag
gagatttttgtgtttgtacagtacttggatgaagacctgaaggtagctgggaaatacaaa
ggaaatgactatagccagtactctccctggtcctgtgacaccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcaaggagtgtggagatggcgaatgta
gatagtaaagccatgcgtgaccagcgattagacatgcagcgacgagcagcagagactggt
gatgatgacctcattccatttggagaccgaccaactgtgtcgagatttggggctatctct
cgtacttccaaagcgatgtaccagaattctggtcccatgcaggccatggcggttcaggga
gctaccaccaaatcaatcatttcggactacaatccttatggaactcatggtggttgggga
ggctctccatattctcctcatcaaaatataccttctcagggacgtttcaatgacagggag
agactgtccatgtcagatgtggctggtcatgggaaacaattgccctcagcggagcgagag
cagcagctgcgcatggagctgcagcaagtagaccatcagattagccagcagacacaaatg
cgaggactagaggctgttagtaacaggctgctgttgcagagggaggcgactaccctggca
ggccaaccacagcccccacccccacctcccaagtggcctgggatgatctcaagtgaacag
ctgagcttggagctacaccaggtggaaagggaaattgggaagagaacccgtgagctgagc
atggagagccagtcttcactggatataaaaaacaaactgggcaccactaaacagacagaa
aatggacagttagaatcgcaaagcaaggttccaactgaggacctcgcactgacattcagc
agtgatgttccaaatggatcagccttgacacaagagaacattggcctcctgtcaaacaag
acggcatctcttagcctgtcagaggacccagagggaggaggagacaaccatgactcccag
agagcgggagttacgcccacatctgctccatga
DBGET
integrated database retrieval system
