Mycteria americana (wood stork): 142413801
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Entry
142413801 CDS
T11228
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mame Mycteria americana (wood stork)
Pathway
mame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142413801 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142413801 (EDC4)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
142413801 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
142413801 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
NBCH_WD40
DUF2383
Motif
Other DBs
NCBI-GeneID:
142413801
NCBI-ProteinID:
XP_075366439
LinkDB
All DBs
Position
8:27085944..27124018
Genome browser
AA seq
1401 aa
AA seq
DB search
MASSSSIDIEDATQHLRDILKLDRQGGPVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSL
AKPVHRSISLGTLQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKQVKI
QPVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVA
DLAFAHLNSNQLACLDEAGNLFVWRLAMDKEKIQEEILVNIKRPDNTPLNTSRRIIWCPF
IPDDNEESGEEGSQTLALLHEDRAEVWDLDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEY
LILSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPA
EEENDNLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMSASMPSHGS
HEEFAFPDHMADLSTEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDA
FMTPSTSLQQIAVSPGSSISSLTAVTAMSSTSVTDASMPRPSEDLTVSPKMQLDTSLTLS
SSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGNPSLALELQEVEPLVVPQASPTRERSP
DVISSASTAMSQDIPEIASETLQRSFVAAPSGLPSEVLEPSHHTDSMASAASALHLLSPR
NRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASSDSVVSQPWPAAPDITRETRNS
MADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTTGGFGAKAST
QRLPVKDWKAKASPRASPKLKRKGKKDDGDVNQSPRSSNNQVTPEFQDELMCILRSQQRE
LSELRQNQMELLQRLTDHLDAIQSSLMGHVERVIDSQQEQEQRRLDRALTEGQQRNGQLQ
EHLSQQLSQSLSTAVCNRLERTIREEMKKTVPQCISKSMDPIAGQLSNTIAAKLTAVEST
LKESITKLVKSKNLTDTIVRATADTLQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDT
FKQGTQEYIQQLETHLKNKKVREQEVRDPLLNQLRQLISTFQSTTEQLASTVTASVHAEV
QHQLHIIVGNMQEAILAQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLD
FQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQQPCPLSQPVLLS
LIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQVEPNNT
LSKPARRLMIMLQGLVTPSMT
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcctccagcatcgacatcgaggacgcgacccagcacctgcgggacatcctc
aagctggaccggcagggaggtccagtgaatgagaaccagagaccatcaaattcgtataat
ggagacctgaatggactgttggtgcctgatcccatcgtggctggagatggaccttctttg
gctaagccagtgcatcgcagcatttctctgggaacccttcaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgtgtagtgatatcagcaaaagatgtggagatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaagcaggtgaaaata
cagcctgttgctagatatgactgggagcagaaatactattatggcaatctgatagctgta
tcaaactcttacctggcttatgccattagagctgccagtaatggctctgctatggtgcgg
gtgttgagcgtcagcactgctgagcggaccttgctgaaaggattcacaggcggtgtggca
gacctggcttttgctcatctcaactccaaccagctggcatgcctggatgaggctggcaac
ctttttgtctggcgcctggccatggataaagaaaaaatccaagaggagatcttggttaac
atcaagagacctgacaataccccgttgaacacctctcgaagaatcatctggtgccctttc
atcccagatgataatgaggagagtggtgaagagggaagtcagacattggcattgttgcac
gaggacagggcagaggtgtgggatttggacattatccgaacgaacaacagctcctggccg
gtggaagtgcctagcatcaaagaaggcttcatcgtagtgaaaggccacagcacgtgcctg
agtgagggagcactttctccagatggaactgtgttggccacagccagccatgatggtttt
gtcaaattctggcagatctatattgaggggcaagatgagccaaggtgtcttcatgagtgg
aaaccccatgatggtaggcctctttcctgcctgctcttctgtgacaaccataagaaacaa
gacccagaggttcccttctggagatttctcatcacaggagcagatcagaatagagaactg
aagatgtggtgcactgtgtcttggacctgtctgcaaacagtccgcttttctcctgacatc
ttcagctccatgagtattcttcccagcctgaaagtctgcctggacctctctgctgaatat
ctgatactgagcgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaa
gaggagggcaaagcttacttcagctccatctcagagttcctccttacccacccggtccta
agctttggcatccaggcagtgagccgctgccggttaaggcacaccgaagtgctcccggca
gaagaggaaaatgacaacttgagtgtagaaggtgctcagggagctggggctgttgaatca
gcagcaggcgtgctgataaaactcttctgtgtgcacaccaaagccctacaggatgtgcag
attagattccagcctcttcatagtcctgacatgagtgcatccatgccttcccatggctct
catgaagaatttgcctttccagaccacatggctgatctaagcacagaagggctgggatct
gaaaaaggatcagtgcatggctctcaaccagacctgcggcgtattgctgatctgcctgta
ccagcagactttctgtctctctcaaatgatgccaaacctaagctgatgactccagatgca
ttcatgacaccaagtacctctcttcaacagattgctgtatctccaggcagcagcatcagt
tccctgactgcagtcacagctatgagtagcacttctgtcactgatgcctctatgcccagg
ccatcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctgagt
agcagcagtctccagactagtcctaggagccattcagttcttatcccaggcctccctgac
aagctaacaccaaaggcacctgttccagtcacgccaggaaacccctctctagcactggaa
ctgcaagaggtggagcccttggtggtgcctcaggcttctcccacccgcgagcgctcgcca
gatgtcatttcatctgcttccacagccatgtcccaagatatcccagagattgcttctgag
accttgcaacgcagctttgtggcagctccatctgggctaccttcggaggtgctggagccc
agtcatcacacagacagtatggcatctgctgcctcagccttgcatttgttgtctccgagg
aaccggcacaattcagagcacagccaccactctttggacatgcctccagtggaggtggac
agactgaatgctccatcattactggagactgctttaactcaggaaaatgcatcttccgac
agtgttgtgagtcagccatggccagcagctcctgacataaccagagaaaccaggaacagc
atggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctatcatcga
cacagctaccacctgctgcagcatgacagccaggatgctagtgcagaacaaagtgaccat
gatgatgaagtagcaagcttggcttctacgacaggtggatttggtgccaaagcgtctaca
cagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttccccaaagcta
aagcggaagggcaagaaagatgacggggatgtgaaccagtcaccaagatcatctaacaac
caggtgacaccagagttccaggatgagctgatgtgcatattgaggagccaacagcgggag
ctctctgagctgcgtcagaaccagatggagctgctgcagagactcacagatcaccttgat
gccattcagagctcacttatgggtcatgtggagagggtgattgactcccagcaggagcag
gagcagagaagactagaccgagcactgacggaaggacagcagcgcaatgggcagctccag
gagcatctgtctcagcagctctctcagtccctttccactgctgtgtgtaaccgtctggag
aggaccattcgtgaggagatgaagaagaccgtaccccaatgcatttccaagagcatggac
cctattgctggccagctgagtaacaccattgccgccaagctcactgctgttgagagcaca
ctgaaagagagtatcaccaagctagtgaaatcaaagaaccttacagataccattgtgagg
gcaacagccgataccctgcaggggccgattcagtcagcttacagggaagcatttcagagc
gtcgtattgccagccttcgagaagagctgccagtccatgttccagcaaatcaatgacacc
ttcaagcagggcacacaggaatatatccagcagcttgagactcacttgaagaacaagaag
gtacgagaacaggaggtccgggacccactgctgaatcagcttcgacagctcatcagcacc
ttccagagcaccacggagcagttggcttccactgtcacagccagtgtacatgctgaggtg
cagcatcagctgcatattatcgtgggcaacatgcaggaggctattttggcccaggtgcag
agagtcattaaaggagaagtgagcctggctatgaaagagcagcaagcagctgtcacctcg
agcatcgtccaggcaatgcgctcggcagctgggactccaatcccatctgctcacttggat
ttccagtctcagcaaactcacatccttcagctgctccagcagggacacctcaaccaagct
ttccagcaggctctaacagcagctgatctcaacctggtcctgtatgtctgtgagactgtg
gatactcagcaagtatttggacagcagccgtgcccgctgtcccagcctgtgctgctctct
ctcattcagcagctctcctcggatttgggtactcgtacggaactgaagttgaattactta
gaagaagcggtgatgcacctggaccacagtgaccccatcacccgagaccacatggggtca
gtcatgaatcaggtacggcagaagctcttccagttcctccaggtggaacccaacaacacg
ctgagcaagcctgcccgtcgcctcatgatcatgctccagggcctggtcacccccagcatg
acctag
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integrated database retrieval system
