KEGG   Mycteria americana (wood stork): 142413849
Entry
142413849         CDS       T11228                                 
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
mame  Mycteria americana (wood stork)
Pathway
mame03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142413849 (SF3B3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mame03021]
    142413849 (SF3B3)
   03041 Spliceosome [BR:mame03041]
    142413849 (SF3B3)
   03036 Chromosome and associated proteins [BR:mame03036]
    142413849 (SF3B3)
Transcription machinery [BR:mame03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     142413849 (SF3B3)
Spliceosome [BR:mame03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    142413849 (SF3B3)
 Complex B
    142413849 (SF3B3)
 Complex C
   U2 SnRNP specific factors
    142413849 (SF3B3)
Chromosome and associated proteins [BR:mame03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     142413849 (SF3B3)
    TFTC complex
     142413849 (SF3B3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7
Other DBs
NCBI-GeneID: 142413849
NCBI-ProteinID: XP_075366586
LinkDB
Position
8:complement(28144763..28175545)
AA seq 1217 aa
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSSTG
DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtttctctacaacctgacgttgcagcgtgccaccggcattagctatgctatccatggc
aatttctcaggaaccaaacaacaagaaattgttgtttcccggggcaagatcctggaatta
ctccgccctgatcccaacacagggaaggttcacaccctgctgactgtggaagtgtttgga
gtcattcgctccctcatggcctttaggctgacaggtgggaccaaagactatatcgttgtg
ggcagcgattcgggacgcattgttattctggagtaccagccctcaaagaacgtgtttgag
aagattcatcaggaaacctttggcaagagtggatgtcgcagaatcgttccaggccagtac
ttggctgtagacccaaagggccgtgctgtcatgatcagtgcaattgaaaagcagaagctg
gtgtatattttgaacagagatgctgctgctcgcctcaccatttcctccccgctggaagcc
cataaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaaccca
atgtttgcttgcctggaaatggattatgaggaagcagacaatgatccaacaggagaagct
gcagccaacacacaacagacgttgacattttatgaactggacttgggtttgaaccacgtt
gttaggaagtacagtgagcccttggaagagcatggcaacttccttataacagttcctggt
ggttctgatggacctagtggggtgctgatctgttctgaaaactatattacttataaaaac
tttggtgaccagcctgatatcagatgccccattcccaggagacggaatgacttggatgac
ccagagagaggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc
ttcctggcccagacagagcagggagacatcttcaaaattactctggagactgatgaagac
atggtaacagagattcgactaaagtactttgacactgttcctgtcgctgctgccatgtgc
gtgctgaagacagggtttctctttgtggcatctgaatttggaaaccattacctgtaccag
atagctcacctgggtgacgatgatgaggagccagagttctcttctgccatgcctcttgag
gaaggagatacattcttttttcagccacgacctctcaagaacctggtgctggtagacgag
ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca
ccccaattgtatgtggcttgtggtcgcgggccccggtcatctctgagggttctgagacat
ggacttgaggtatctgaaatggccgtctcagagctgcccggtaaccccaatgccgtatgg
acagttaggagacatgttgaagatgaatttgatgcctatatcattgtgtccttcgtaaat
gccacactggtgctgtctatcggagagactgtagaagaagtgactgactctggattcctg
ggtactacacccaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat
ccagatgggatccggcacatccgagcagataagagggtaaatgaatggaagacaccaggg
aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtagtgatagcactgactgga
ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtatacggagaga
aaggagatgtcggccgacgtagtttgcatgagcctggccaatgttccccctggggagcag
cgatcccggttccttgctgttgggctggtggacaacactgtcagaattatttcccttgac
ccttcggattgcttacagccgctgagtatgcaggcccttccagcacagcctgagtcgctg
tgcattgtggagatgggtggcacagagaagcaggacgagctgggggagaggggctccatt
ggctttctgtacctgaacattggactgcagaatggtgtgctgctgcgaactgtcctggat
cctgttactggcgatctttctgacaccaggaccagataccttggctcacggcctgtgaaa
ctcttccgagtccgaatgcaaggccaagaggcggtgctggctatgtcaagccgttcctgg
ctcagttattcctatcagtcacgcttccacctgactccgctgtcttatgagacactggag
tttgcgtctggttttgcttctgagcagtgcccagagggcattgtggccatctccacaaac
acattgaggattttagcactggagaagctgggggcagtgttcaaccaggttgccttcccg
ttgcagtacacacctcgaaaatttgtcattcacccagagagcaacaacctgatcatcatt
gagacagaccacaatgcttacactgaggccaccaaggcacagaggaagcagcaaatggct
gaggaaatggtggaggctgcaggtgaagatgagagggagttggctgcagagatggctgca
gcctttctgaatgagaatcttccagagtccatttttggtgctcctaaggcagggaatgga
cagtgggcctctgttatcagggtgatgaaccccatccagggaaatacgttggatctggtc
cagctagagcagaatgaagctgcctttagtgtggctgtgtgccggttctccagtactggt
gatgagtggtacgtgctagtgggagttgccaaggacctgattctgaacccacgctcggtt
gctgggggatttgtgtacacatacaagctggtgaatagtggtgagaagctggagtttctg
cacaagacccctgtggaggaggttcctgcagccattgctccgttccaaggtagagtctta
attggagttggaaagctcttgcgcgtttatgacttgggcaagaagaaactgcttcggaag
tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagta
attgtttcagatgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag
cttatcatctttgctgatgacacttatccccggtgggtcactacagcaactctcctggat
tatgacactgtggctggagcagacaagtttggcaacatctgcgtggtgagattgcctccc
aacaccaatgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggg
cttcttaatggagcatcacagaaggctgaagtgattatgaattatcacgtgggagagaca
gtgctgtccttacagaagaccacactgatcccaggaggctctgaatctcttgtctatacc
accttatcgggggggataggaatcttggtcccttttacttcccacgaggatcatgacttc
ttccagcatgtggaaatgcacttaaggtctgagcaccctcctctctgtggacgagaccac
ctcagtttccgctcctactacttcccagtgaagaatgtgatcgatggggacctgtgtgag
cagttcaactccatggagcctaacaaacagaagaatgtggccgaagagctggaccggacc
ccacccgaggtgtccaagaagctggaagacatccgcacacgctatgctttctga

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