Mycteria americana (wood stork): 142413938
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Entry
142413938 CDS
T11228
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
mame Mycteria americana (wood stork)
Pathway
mame04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142413938 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mame04131
]
142413938 (VPS35)
Membrane trafficking [BR:
mame04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
142413938 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
142413938
NCBI-ProteinID:
XP_075366792
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All DBs
Position
8:35318198..35344736
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AA seq
797 aa
AA seq
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MTPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLS
PKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYV
KSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQADEETTGDISDS
MDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYK
QIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNII
IALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAM
KCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLK
HFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQEQVDAIMNLVSTLIQDQPDQPAEDP
DPEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQL
AFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENH
ETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASK
LLKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQL
FIEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRL
RRESPESEGPIYEGLVL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaacaacacagcagtctcctcaggatgaacaggaaaaactcctggatgaagcc
attcaggctgtgaaggtgcagtctttccagatgaagagatgcttggacaaaaacaagctc
atggatgctctgaaacatgcttccaacatgcttggtgagctgcggacttctatgttatct
ccaaagagctattatgagctctacatggcaatttctgatgagctacactacttggaagtc
tacctgacagatgaatttgccaaaggaaggaaagtggcagacctttatgagctagtacag
tatgctggaaatattattccaagactgtatctcctgataacagtaggtgttgtctatgtc
aagtcatttccacagtccaggaaagatattttgaaagacctggtggagatgtgccgtgga
gtacagcatcctcttagaggcctctttcttagaaactatctcctgcagtgtaccaggaat
atcttaccagatgaaggcgagcaagcagatgaagaaaccactggagacatcagtgattca
atggattttgtgctgctgaacttcgctgagatgaacaaactttgggtgcgaatgcaacac
cagggccatagtcgggacagagagaaaagggagcgagaaaggcaggaactgagaatccta
gtaggaacaaacctggttcgcctcagtcagttggaaggtgttaatgtggagcgatataag
cagattgttctgcctggaatattggagcaagttgtaaactgtagagatgctttagctcag
gagtacctcatggagtgcatcatacaggttttcccagatgaatttcacctccaaaccctg
aacccatttctcagagcctgtgctgagctgcaccaaaatgtgaatgtgaaaaatataatt
attgctttaattgacaggttagctttatttgcacatcgcgaagatggacctggaatccca
gcggatatcaaactgtttgacatcttttcacagcaggttgctactgttatacagtctcgc
caggacatgccctcagaggatgtggtatctttgcaagtttctctcattaacttggctatg
aaatgctacccggaccgtgttgactatgttgataaggtgttggagacaactgtggaaata
ttcaataaacttaatctggaacatattgcaacaagcagtgctgtttcaaaggagctgact
aggcttttgaaaatccctgttgatacttacaacaatatcctgacagttctgaaactaaaa
cattttcatccgctcttcgaatactttgattacgagtccaggaagagcatgagttgttac
gtgcttagcaatgtattggattataacacagaaattgtgtcccaagaacaggttgatgct
ataatgaatttggtatccacgctgatccaggatcaaccggatcagcctgctgaagatcct
gaccccgaggactttgctgatgagcagagtcttgtgggaagatttattcatcttttgcgt
tcagatgaccctgaccaacagtatctgatcctaaacactgcccggaaacactttggtgca
ggtgggaaccaacgtattcgttttacactgccaccattggtttttgctgcataccagctt
gcttttcgctacaaagagaactccaaagtggatgacaaatgggaaaagaagtgccagaag
atcttctcgtttgctcatcagaccatcagtgctctgatcaaagcagaactggcagagctg
cctcttcgtctcttcctacaaggagcactcgctgcaggagagattggctttgagaatcat
gaaactgtggcctatgaattcatgtcccaggccttctctctatatgaagatgaaatcagt
gattcaaaagcacagctggctgcaatcaccttgataattgggacatttgagaggatgaag
tgcttcagtgaggagaaccacgagcctttgaggactcagtgtgcactggcagcctctaag
ctccttaagaagccagaccaatgccgggctgtgagcacttgtgcccatctgttttggtct
ggccgaaatactgacaagaatggagaggagcttcatggaggaaaaagagtgatggaatgc
ctaaagaaagctctgaagatagcaaatcagtgcatggacccttctctgcaagtccaactt
ttcatagaaattctgaatagatatatctatttttatgaaaaggaaaatgaggcggtgaca
attcaggttttgaatcagcttatacagaagataagagaagatctcccaaaccttgagtct
actgaagaaacagaacaaattaacaaacactttcataacacactggagcacttgcgtctg
aggagggaatcaccagaatctgaggggccaatttacgaaggtcttgttctttag
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