Mycteria americana (wood stork): 142414506
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Entry
142414506 CDS
T11228
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mame Mycteria americana (wood stork)
Pathway
mame03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142414506 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142414506 (BARD1)
04121 Ubiquitin system [BR:
mame04121
]
142414506 (BARD1)
03036 Chromosome and associated proteins [BR:
mame03036
]
142414506 (BARD1)
03400 DNA repair and recombination proteins [BR:
mame03400
]
142414506 (BARD1)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
142414506 (BARD1)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
142414506 (BARD1)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
142414506 (BARD1)
DNA repair and recombination proteins [BR:
mame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
142414506 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
Ank_KRIT1
ANK_LRRK2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
RTT107_BRCT_5
NIBRIN_BRCT_II
zf-rbx1
zf-RING_UBOX
Siva
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
142414506
NCBI-ProteinID:
XP_075367929
LinkDB
All DBs
Position
9:3986472..4030818
Genome browser
AA seq
791 aa
AA seq
DB search
MREVLRGRSGNRPAPGGQPLAAPAMESPGPSWARTRAALGRLERALSCSRCAGILREPVS
LGQCEHVFCLSCVGDCVGTECPVCHMPAWVQDAQINRQLDNMIQLCSKLRHLLGMDTSDS
TEDMSTPTDSDLKNKKEQIKMWFSPRSRKIRCVLKKSQPETKSYDLCQDASSIYNFFPSP
PHEKPSKLTKKPTQRQSKKMKKKRLADINKAWSLEKPEQKGGVEEKTPKEKCVTISSQLV
VLCTPEPNSPEETLQQESVKEADSSKNTENVEISPQVKSSEETEDTHTEVACPAQVSKEK
NCARETSLSIESGTTPLKRGREQSRLPVTSQSKRPRRTERSVIGKPSSQADCLEGLPQGR
PISPATEHKTPVQISSSVSKLTDTVMKTRSSAVFQAINSPSRSKSLSTPSTSKTCNQVGM
PHSPSVLKSPGGNTIARRNYKGETLLHVASIKGDLAAAEQLLKNGADPNVKDNAGWTPLH
EACNHGHKEVVELLLQYKALVNTTGYQNDSPLHDAVKNGHVSIVELLLLHGASRDAVNIF
GLRPVDYAESEKMKSVLMLPVKNESFSLNQPSEALSPSQPRHGPLGLLGSNLSLQQQKLL
NKLAAVLKARRCTEFNSRVTHLVIPDVPMPRTVKCMMAVLTGCWVLKFEWVQACLQTAVR
EQEEKYEIQGGPQRGRLNREQLLPKLFDGCYFYFLGSFNRHQKSDLVELVRAAGGQILVR
QPKPDSDVTQTINTVAYHAESTSDQRFCTQYVIYDVASKFKPEKIRQGKVWMAPSSWLID
CVMAFQLLPVK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaggtgctgcgcggccgctcgggcaaccggccggccccgggcggccagcccctc
gccgcccccgccatggagtcgcccggcccctcctgggcccgcacccgcgccgcgctgggg
cggctggagagggcgctgagctgctcccgctgcgccggcatcctgcgggagcccgtgtcc
ctggggcagtgcgagcacgtcttctgcctatcttgcgtgggtgactgtgttggcacagaa
tgcccagtgtgccacatgccagcctgggtgcaagatgcacagataaaccggcaactagat
aacatgattcagctttgcagcaaactgcggcatctgctgggtatggacacctcagattca
acagaagatatgtccacaccaactgactcagacttaaagaataagaaggaacagataaaa
atgtggttcagcccaagaagtaggaagattcgatgtgtcctgaagaagagtcagcctgag
actaaaagctatgacctttgtcaagacgcatcttcgatttataatttctttccttcccct
cctcatgaaaagccctccaagctgacaaaaaagccaacacagagacagagtaagaagatg
aagaagaaacgtctagcagacattaacaaagcatggagcttagagaagcctgagcagaaa
ggaggagttgaggagaagactcccaaggaaaaatgtgtgaccatcagcagtcaactggta
gtcttgtgcactccggaaccaaatagccctgaagagacacttcagcaggagtctgtaaag
gaagctgactccagcaaaaatacagaaaatgtggaaatatcaccacaggtaaagtcctca
gaagaaactgaggacactcatactgaggttgcgtgccctgcacaagtcagcaaggaaaaa
aattgtgctagagagacatcattgtcaatagaaagtgggactacgcctttaaaacgtgga
agggagcaatccagacttccagttacttctcagtctaaaagaccaagaagaactgagagg
agcgttattgggaagccatccagtcaggcagattgcttagaggggttacctcagggtcgc
cccatctccccagcgactgaacacaagacaccagttcagatttcttcctctgtatcaaaa
ctcactgacactgtaatgaagaccagaagctctgcagtctttcaagcaataaatagtcct
tcacgttcaaaatctctctctaccccatctacttctaagacttgtaatcaagtaggaatg
ccacatagtccttctgtgttgaagtcccctggtggtaacacaattgccagaagaaattac
aaaggagagactttgctccatgttgcttcaatcaagggtgacttagcagctgcggaacag
ctgctgaaaaatggggcagatcccaatgtcaaagataatgctggctggacaccactgcac
gaggcatgtaatcatgggcacaaagaagtggtggagctgttgctacaatacaaggcgtta
gtgaatactacggggtatcagaacgactcgcctcttcatgatgctgtcaagaatgggcat
gtgagcattgttgagctgctgcttttgcatggtgcctcccgtgatgcagttaatatattt
ggtctgcggcctgtggactatgcagaaagtgaaaagatgaaatctgtgctaatgttacca
gtgaagaatgaatcattttcacttaaccagccctctgaggcactgagccccagccagcca
agacatggacctcttggattactggggagcaaccttagtttgcagcaacagaaattgctg
aacaagctagcagcagttctgaaggctcgaaggtgtactgaatttaacagtagagtaact
caccttgttatccctgatgttccaatgccaagaactgtcaaatgtatgatggctgttctg
actggatgttgggtcctcaagtttgaatgggtacaagcctgtctacaaaccgcagttcga
gaacaagaagagaagtatgaaatccaaggtggcccacaaagaggccggctcaacagagaa
cagctgctgcctaagttgtttgatggatgctacttctattttttgggatctttcaaccgc
caccagaagagtgatcttgtggagttggtcagagcggcaggaggacaaattctggttagg
cagccaaaaccagacagcgatgtgacgcagacaatcaacacggtggcttaccatgcagaa
tctacttctgaccagagattttgcactcagtatgtaatctatgatgtggcttctaaattc
aagccggagaaaattcgtcagggcaaagtctggatggccccctccagctggcttatagac
tgtgtgatggcatttcagctcctgcctgtaaaatga
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