Mycteria americana (wood stork): 142415154
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Entry
142415154 CDS
T11228
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
mame Mycteria americana (wood stork)
Pathway
mame03273
Virion - Lassa virus and SFTS virus
mame04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
142415154 (PCDH11X)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
142415154 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mame01009
]
142415154 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mame04515
]
142415154 (PCDH11X)
Protein phosphatases and associated proteins [BR:
mame01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142415154 (PCDH11X)
Cell adhesion molecules [BR:
mame04515
]
Cadherins
Protocadherins
142415154 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Ig_CLSTN
Cadherin_CELSR2_9th
Cadherin_2
Ig_Cad99C_N
Cadherin_FAT4_N
K319L-like_PKD
Fibulin_C
TMEM154
Big_9
Motif
Other DBs
NCBI-GeneID:
142415154
NCBI-ProteinID:
XP_075369290
LinkDB
All DBs
Position
10:complement(20911435..21427449)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNDQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNKPVFVIPASNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSGSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEMGRPQTPLKETTLEAWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGA
STSHPLPLGFPQEEYYEQASPNSRTEGDGNSDPESIIEVNLQKALAEASETCTQECLILG
HSDNCWMPPSLTQYQQSNTPLPSFGFQQGWGRGARPEGRHTLGRPLPKDDTDKGQGGPRP
QFYNTCKRHCASEDPVKVIPLANFAASHQAPVSGSSTTFIHEHQL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcaa
tctggcgcacaggagaagaattataccgtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctgacgctggacccagatgtgcccctttcctcacca
ctacagttcaagcttgtgtataagactggggatgtaccattagtacgggtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagaaaagctgtgctctggcatc
tttagtgagaatcgctgcttttatgaggtggaggttgctgttttgcctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgctcccctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaattaattctcgctattctgtc
ccatctgccatcgatccggacattggtgtgaacggtattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacatttggatccattacaaacgatcagggtcaaaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccaa
cagatcctggatagggagcagaaggatacctatgtgatgaaaattaaagttgaagatggt
ggaagccctccaagatctagcactgccatcctgcaagtcacagtgactgatgtgaatgat
aatcgcccagtcttcaaagagaatgacattgaagttagtgttccagagaatgctccagtg
ggcacctctgtttctcagctccatgccactgatgcagacctgggctcaaatgcacaaatc
cacttctatttcagcaatcagatctccagtctggccaaaaggctctttgccattgataac
accaccggcctcatcactataagagaaccactagacagggaggaatctcctgtacacaaa
ttaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgttaat
gtcacagatattaatgacaatgtcccatcaatagacacaagatacatcatcaatccagtg
aacgggacagtgcttttgtctgagaaggctccacttaatacaaaaattgcgttgataaca
gtaatggacaaggatgctgatctgaatggaaaagttacttgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataatcagtttcttctggagacagccacgtttcta
gattatgaagccacacgggaatatgccattaaaatagtggcttcagattcagggaaacct
cccttaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaatgacaatgcccca
gtttttacacagcctatcataggtctttccatccctgaaaacaatgctcctggtactcag
ctgaccaagataagtgctacggatgctgacagcgggcgcaatgctgagatcagctatatc
ctgggttctgatgcaccccctattttcaaccttgaccgccgtacaggcattctgacagca
gtgagaaagctggacagagaaaagcaagacaggtactccttcactgtgctggctaaggat
aatgggatgccacccttgcagaccaatgctactgtcacagtgtccgtcctggaccagaat
gacaacagccctgctttcacacataatgaatataatttctatgtgccagaaaacttaccc
atgtatggcacagtggggcttatcacagttacagatgctgactctggagagaatgctgcg
gtcactctctctatattaaatggtagagataatttcattatagatccacttacaggtgta
ataagacctaatattacctttgatagggagcagcaggggtcatatactttccaggtaaaa
gctgtggatggaggaagactgcagcgttcctcaactgccaaagtgaccatcaatgttgtt
gatgtaaatgacaacaagcccgtttttgttattcctgcatctaattattcgtatgagttg
gttccaacatcagccagtccagggtccgtagttactaaagtctttgcagtggataatgac
acaggaatgaatgcagagctccgctatagcatcataggtgggaactcaaggggcttgttt
acaattgaccaattaacaggcaatattactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctaggacagccggagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacggtcaccaatagttcctatgtacaagag
ctagtgcgcaggaatatggaaactccagttggccagaatgttggggatggtgagataacc
ccacaaaccaatgattatgtcaagatcatcattgccattattgcaggcactatgacagtt
attctggtcatttttgttactgctttagtacggtgccgccagacgcctaggcacaaggtt
gtccaaaaaaacaagcagagtggggaatgggtttccccaaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctctccgaaaagtctcctcctcaattttgtgact
attgaagaatctaagcctgatgatcctggccatgagcacataaatggcactttagacatt
cctgtagagctagaagaacagactatgggaaaatataactgggccaccacaccaaccaca
tttaagcctgatagcccagatttagcaaagcactacaagtctgcttctccgcagcctacc
tttcaaattaaacctgagactcctgtaccccccaagaagcaccatgtcattcaggaactg
cctctagataacacctttgtggtgggctgtgactcactctccaagtgctcatcaggcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagaccccaggcccc
atacacaccagacagcacacaaaagaaatgggaaggccacaaactcctttgaaagaaaca
accttggaggcttggactcagccacagcctcagcgccgtgtcacgtttcacctaccagat
ggctcccaggaaagctgcagtgacagtgggctcggagaccatgaacccaccagcggtgct
agcacatcgcaccctctgcccctcggcttcccccaggaagagtactatgagcaagcttca
cccaacagccggacagaaggagacggcaactcagacccggagtccattatcgaagtaaat
ctccagaaagccctggctgaagcttctgaaacctgcacgcaggagtgtctcatcctaggc
cattctgacaactgctggatgccaccttctttgacacagtatcagcagtccaacacccct
ttgccatcgtttgggttccagcaaggctggggccgaggagccaggcctgagggacgacac
actcttgggaggccccttccaaaggacgacactgacaaaggccagggtgggcccaggccc
cagttctataacacctgcaaaagacattgcgccagcgaagatcctgtcaaagtcattcct
ctggcaaacttcgccgcgtcccaccaggcaccggtgtctgggagtagcactacgtttata
catgagcaccagctataa
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