Mycteria americana (wood stork): 142416083
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Entry
142416083 CDS
T11228
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
mame Mycteria americana (wood stork)
Pathway
mame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
142416083 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mame04121
]
142416083 (SLX4)
03400 DNA repair and recombination proteins [BR:
mame03400
]
142416083 (SLX4)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
142416083 (SLX4)
DNA repair and recombination proteins [BR:
mame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
142416083 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_jaz
B129_C2H2-zf
SpaA_2
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
142416083
NCBI-ProteinID:
XP_075371292
LinkDB
All DBs
Position
12:complement(17435180..17468443)
Genome browser
AA seq
1878 aa
AA seq
DB search
MDEQDNDFKELWANLLGRAKKKAGDTEAAKRAQNRSKSTAARSKLRRGKAAAKSQNHHHL
RAVKETNLPQDLGPKEQTLVHKEDGDAAACSSGETAQGDGKRNPFPASQLSTVASECSQR
TLTVNTLSSCSQTTLSFHPATQPGTCSSPTSKIPPLAGSKMRVAELVVERMQQFKRVAPE
QLKHSTDDSLPKSVASGDFPDESQEQNPPENDTCHLPSMEHDGALALALQQETKEEALAS
LEDAGLFFCQICQKDLSAMNTTRREQHVNRCLDEMEEAQMSSSSKPLVPECPICGKQFQT
PQSRVSHLKRCAVEMDVPPKLLLQAVQLQVSSLGDAPLQCPSNQPSGSKRKGSSKEDSKK
MQKRAKLETKDEDLLVAMAMSRSLLEQEKQEQAKSVTNVKPVAALPIKWKPGSEKKRRKR
GPTAPPPLLLQDPEKARKRIQERVAMLLAEEVEFPPTPQLPTSRILEDESGKATWLLPLS
KTRECFLWNISALTGPYDPESFYTAGLTPPIVPWKPVQNHKPENLLPSVGSDQPKVSQQI
QPDLSSHEPACTEVGGQTSDESKSGPEGDGQFLPHSQKDVQTLQDLVELAREGLTLTQWN
LDVAHVQAAEQPGKELTSSDTPHSGFVPSSKEKSLLTSSCKRSSLRLLAEDFSAMVNNPH
LSDVQFQVDCGEVLYAHMFVLYARCPQAIQVVHSQGFLVEEDGNAQTRRVLLSDVTGEAV
CAFLRYLYAADADIPAGVLPQVGALAARFGVRELMAKCENNTGASQVSSGVDSEDDLISV
RDDKECEDRAENFQDLLKSVWVGEDEEEVAMLNPECQKEDDNRVGEQELEEIYEFAATQR
KMVQGETEVSEGTDCSICSDTEAAQGTNQQTEEEEVKRYESASTSNSFKDLRDDNNVERS
KCDSSAQEEKMQNINRCKSVTDPQTTFVPHHSEPQKWDVASHDATANEGEAVRRCEGVKD
SESSQVSRDKADHCEKQFPSFHGDTNINESYERLFSATQGDYCEPSPMKEVIKESGKAPS
EKHADVNDSLLYSKSQKDLSPRRNSFYGSPPPKPYVPLFPAVGSSPASPKSERKFATEHV
STPKQNKQEKSFPSDEIHFQKANELDTASRNENTISPAELPHIDLNKRTCCHDPVLSSLV
IRTQDAAAQGNKEGDVIVLSSDDEMELQEDKKSPESGSALKKMEMPGQLKCTNVEQGPET
PKPEHNSSVTETEQRSTQVSCGITDTVHISNDVKMSTELPLSRQTDACTESKRSPNLSPE
KRLGHEMSSGTDSSWLVPDTPVLSKSRSFSTQTQVTSINSLKSPGSKLSTKNLAAGNSNH
EMTGNLIKVCETTLSDKHLPMENSVSERSPSSSPAAGSFSKNSPPVSPGDPVLLSPGHTN
IKSKCAKISFSSKPVPLSHEQSVEDKTNISVVEVEDSEKEISLPSLNSSVLLCDEPPVPV
DDCWYVEYLSPVRGNSQDSNQVSRAKTSTASSARPGSWHDQWESPVHVQEIKGSTPLRGS
PVGRRTTLLCLEKSPIEPCSSAGSRPSYLNSKIWDDWNGEEEEDEFPEMLPLSQRLSAAA
RACQTDPVKTPEPSCQENDRPPSTPMTPMPAYSIMETPQLKKELSRFGVRALPKRQMVLK
LKEIFQYTHQDVDSDFEDEIPYSQPPLQKSPAKRSRQSKADRTAGGKRASASRAVGKRKQ
VATASSALPVGRADDDRVGSCETGCAAPKEGTKTTHHPEGAKEQKRSSVSPERWSLAADG
EEPMLSASQESAVSSVDGSDVSFGSQSSFVNGFEACAFASEEEEEELPASQAAAREEDKL
EAVRCYIRSNTALYHKILFYEPIELADLHTELKQNGIKISKAKLLDFLDAHCITFTTAGA
RKEKEQKRKGNKKQRRRY
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaggacaatgattttaaagagttgtgggcaaatcttttgggtagagcgaag
aaaaaagctggggatactgaggcagcaaagagggctcagaacaggtcaaagagcactgca
gcaagaagcaaattaagaagaggcaaagctgctgctaagagccaaaaccatcatcactta
cgagcagtgaaggaaacgaacttgcctcaagatttaggtccaaaggaacaaacattggtg
cacaaagaagatggtgacgctgcggcctgtagtagtggtgagactgcacaaggggacgga
aagagaaaccccttccctgccagccagctgagtacagtggctagtgagtgtagccagagg
accctgacagtaaatactctgagtagttgttcccagactaccttatccttccatcctgct
acgcagccagggacctgctcttcacccacctcaaagataccaccgctcgcagggtcgaag
atgcgggtagcagagctggtagtggagagaatgcagcagttcaagagagtggcacctgag
cagctaaaacacagcacagatgatagcttgccaaagtctgtagccagcggggatttccct
gatgaaagccaggagcagaacccaccagagaatgatacctgccatcttccatccatggag
catgatggtgctctggctttggctcttcagcaggaaaccaaagaggaagccctggcaagc
ctagaggatgcaggcttgttcttttgtcagatctgccagaaggatctctcagccatgaac
acaacacgacgagagcagcatgttaacaggtgtctggatgagatggaagaagcgcagatg
tcatcctccagcaaaccactggtccctgaatgtcccatctgcgggaagcagttccaaacc
ccacagagccgagtcagtcacttgaaacgctgtgctgtcgagatggatgttcctcctaag
ctgcttcttcaggcagtgcagttgcaggtgtcctcgcttggtgatgcacctcttcagtgt
cccagcaatcaaccaagcgggtcaaagcgaaaaggctcctccaaagaggactcaaagaaa
atgcagaagagggccaaattggagactaaggatgaagatttgctggttgctatggcaatg
tcacgctctctgttggagcaagaaaagcaggaacaagcaaaatcagttacaaatgtaaaa
ccagtggctgctttgccaatcaaatggaagccaggatcagagaaaaaacgacgtaaaaga
ggcccaactgcacctccaccattactgcttcaggacccggagaaggcccgcaaaaggatc
caagagcgagtagctatgttgcttgcagaagaggtggaattccctcccacccctcagctt
cccactagtaggattttggaggatgaatctgggaaagcaacctggctcttgccattgtcc
aaaaccagggagtgctttttatggaatatcagtgcactgacaggaccctatgaccctgaa
tcattctacactgctggattaacccctccaattgtaccttggaagcctgtgcagaaccat
aagccagagaaccttctgccatcagtgggatctgatcagccaaaagtatcccagcaaatt
cagcctgacctcagttctcatgagcccgcttgcacagaggttggaggccaaacttccgat
gaatccaagtcaggccctgaaggagatggacagtttttacctcacagccagaaggatgtt
cagaccctgcaggacctagttgagttggccagggaaggacttacccttactcagtggaac
cttgatgttgcccacgttcaggcagcagagcagccaggaaaagaactgacttccagtgat
actccacatagtggctttgtgccctcgtccaaagagaagagcctcctgacgagcagctgt
aaaagatcctctctcaggttgctggctgaagatttcagtgcaatggtcaacaacccccac
ttaagtgatgtccagttccaggtggactgtggggaagtcctttatgcccacatgtttgtg
ttgtacgcacggtgtccacaggccattcaggttgttcacagccaagggttcttagtggag
gaagatgggaacgcgcagacacgccgcgtgctgctgagcgacgtgacaggagaggcggtg
tgtgcgttcctgcgatacctttatgctgctgatgctgacatccctgctggggtgctgccc
caggtgggggctctggctgccaggtttggtgtgagggaactgatggcaaagtgtgaaaac
aacactggagcaagtcaagtgtcttctggagtggattcagaagatgatcttatctctgtg
agggatgacaaagaatgtgaggacagagctgagaacttccaagacctcttgaagtcagtg
tgggttggtgaagatgaggaagaagtagctatgctgaaccctgaatgccagaaggaagat
gacaatagggtgggtgaacaggagctggaggaaatctatgagtttgctgcaactcagagg
aagatggttcaaggtgaaacagaggtgagcgagggaacagactgcagcatctgcagtgat
actgaggcagcccaaggtacaaaccagcaaactgaggaggaagaggtaaagagatatgaa
tctgcttcaacgagcaacagcttcaaagatttgagggatgacaataatgtggaaagatct
aaatgtgactcgtctgcacaagaagagaaaatgcagaatataaataggtgcaaaagcgtg
actgatccacagaccacttttgtgcctcaccacagtgaacctcagaaatgggacgtagca
tcccatgatgccactgctaatgaaggagaggctgttaggagatgtgaaggtgtgaaggat
tccgaatcatctcaggtctcacgtgacaaggcagatcactgtgaaaaacagtttcctagc
ttccatggtgatactaatataaatgaaagttatgaacgcttgttttctgcaactcaggga
gattactgtgagccttccccaatgaaagaagttatcaaagaatcaggaaaggctcccagt
gaaaaacatgctgatgttaatgattcacttctgtacagcaagtcacaaaaagacctctct
ccacgtaggaacagtttttatgggagtcctcctcccaaaccttatgtgcccctttttcct
gctgttggctcttcacctgcatctccaaaatcagagagaaagtttgccacagaacacgtg
tcaacaccaaagcaaaacaaacaggaaaaatcattcccatctgatgaaatacactttcag
aaagccaacgagctggatactgcatcaagaaacgagaacacaatttctccagcagagctt
ccccacattgatttaaacaagcgtacgtgttgtcatgacccagtgttatcatcactggtc
atcagaactcaggatgctgcagctcaggggaacaaggagggtgatgttattgttttgtct
tctgatgatgaaatggagttacaagaagacaagaagtctccagagtcaggctctgctctg
aagaaaatggaaatgcctgggcaactgaaatgtacaaacgtagaacaaggtcctgagaca
ccaaaacctgaacataactcatcagtcactgaaacagagcagagatcaacccaggtctca
tgtggcattacagatacagtgcatataagtaatgatgtaaagatgtccactgaattgcct
ctcagcagacaaacagatgcttgtacggagagcaaacggagtccaaacctgagccctgaa
aaaaggcttggtcatgaaatgtcttcaggtacagacagctcctggctagtgccagataca
ccggttctgagcaaaagcagaagtttctcaacacagactcaggtcacaagtattaattct
ttaaagagtccaggatctaaactcagcacaaagaacttagcagcaggtaacagtaaccat
gaaatgactgggaatttaataaaagtttgtgaaacaacgttgtcagacaaacatttgcct
atggagaactcagtcagtgaaaggagcccttccagcagcccagcagcaggatcattttcc
aagaactctccaccagtttctccaggggatccagttctcctctcccctggccacaccaac
ataaaaagcaaatgtgccaagatctcattttcatccaaacctgtgcctttgtcccatgag
cagtcagtggaagataaaacaaatatcagtgtggttgaggtagaggacagtgaaaaggaa
ataagtctgccttctttgaatagtagcgtcttgctttgtgatgagcccccagtccccgtt
gatgactgctggtatgttgaatatctgtcaccagtcagaggtaatagccaggactctaac
caggtgagccgtgcaaagactagcactgccagcagcgccagacctggctcttggcatgac
cagtgggagagcccagtccacgtgcaggaaattaagggcagtacccctctccgaggaagt
cctgttggcagaagaacaactttgctctgtcttgaaaagagtcctattgagccatgttca
tcagcgggcagtagaccgagttacctgaactccaaaatctgggatgactggaatggagaa
gaggaggaagatgaatttccagagatgcttcctctgtctcagaggttgtcagctgcagca
cgtgcctgtcagacagatcctgtaaagactcctgaaccttcctgtcaggagaacgacagg
cctcccagcactccgatgacaccaatgccagcttactccatcatggagaccccacagctg
aagaaggagttgagcagatttggagttcgtgctctcccaaaacgccagatggtgttgaag
ctgaaggagatattccagtatactcaccaggatgtggactctgactttgaggatgaaatc
ccatattcccagcctcccctgcagaagtccccggccaaacgctctaggcagtcaaaggca
gaccggactgcaggtggaaagcgtgccagtgcctcaagagctgtgggcaaaaggaagcag
gttgctacggcttcttcagcgctccctgtggggagggctgatgatgaccgtgttggatcc
tgtgaaacaggctgtgcagcacccaaggagggaactaaaacaacacatcacccagaagga
gccaaagagcagaaaaggtcatctgtatctccagagagatggtctctggcagctgatggt
gaggaaccaatgctctcagcatctcaggagtctgcagtttcttcagtggatggaagtgac
gtctcttttggttcacagagttctttcgtgaatggatttgaagcttgtgcttttgcatcc
gaggaggaggaagaggagcttccagcatctcaggcagcagctcgggaagaagataagctg
gaggcagtaaggtgctacatccgttcaaacacagccctgtaccacaagattctcttttat
gagccaattgagctggctgacctgcacacagagctgaaacagaatggcattaaaatttcc
aaggcaaagctgctggactttctagatgctcactgtatcacttttaccacagctggagcc
cggaaagagaaggaacagaaaagaaaggggaacaaaaaacagaggagacgatactga
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integrated database retrieval system
