Mycteria americana (wood stork): 142416119
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Entry
142416119 CDS
T11228
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
mame Mycteria americana (wood stork)
Pathway
mame03430
Mismatch repair
mame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
142416119 (PMS2)
03460 Fanconi anemia pathway
142416119 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mame03400
]
142416119 (PMS2)
DNA repair and recombination proteins [BR:
mame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
142416119 (PMS2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
142416119
NCBI-ProteinID:
XP_075371365
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Position
12:complement(8838168..8851145)
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AA seq
874 aa
AA seq
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MEVAAPCLQPAKAIKPIDRKSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDH
GAELIEVSDNGDGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSDVT
IFTCHKSAKVGTRLVFDHNGKITQKTPFPRPQGTTVNIQQLFYTLPVRHKEFQRNIKKEY
AKMVQVLQAYCIVSKGVRINCTNQVGQGKKSSVVSTTGSPSLKENIGAVFGQKQLQSLMP
FVQLPPNEAVCEEYGLNATDMPQNLYSITGFVSRCDHGVGRSTTDRQFFFINQRPCDPAK
VVKLVNEVYHVYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLME
MFGSDVNKLNVNQKLLDIAGNLKKTLPEETEKPRVEMLPDSEAENPSGEGKRIMTLARLR
ESFSLHQTTGSNFQSPKKVKQQHSSPRQMSLVTTFGTVKTQKAVFSKDSESCHKMDSKMS
IPSRHLRKLEDSEFCSTSESDAGCSTPEAGSCVNSKSVINPSEEEFCSSEEQLQNECPTT
VGCSEKSLECDVQVLGTEHELNQVNDWSNQNKLSQEASSSSPRVKRFKSRSFKSEADDLK
AGKCPEVKNTRNYMPSVDVLVEVKKKTVPLEFSMKVLAEKVKKVIQQQQKSTETQNYRRF
KAKISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYN
FEMLQQHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLI
SLPTSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMR
KLITHMGEIEHPWNCPHGRPTMRHIVSLDLISPE
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgcgccctgcctgcagcctgccaaagccatcaagcccatcgaccgtaag
tctgttcatcggatctgttcgggacaagttgtgctgaatcttggcactgctgtgaaggag
ttggtggaaaacagcctggatgctggagctaccaacattgatataaaacttaaagatcat
ggagcagaactgatagaggtttcagataatggagatggagtggaagaggaaaactttgaa
ggcttgactctgaaacattatacatcaaagatacaagatttttctgatctaatacatgtt
gaaacatttgggtttcgaggtgaagctctgagttcactgtgtgcattaagtgacgttacc
atttttacctgtcataagtctgcaaaggttgggactcgtttggtatttgatcacaatggt
aaaattactcagaagactccttttccacgaccacagggaacgactgttaatatacagcag
ttattttatactttgccggtgcggcataaggaatttcaaagaaacattaaaaaggaatat
gcaaaaatggtgcaggtattgcaggcatactgtattgtttcaaaaggagtgcggattaac
tgcaccaatcaagttggccaagggaaaaaaagctctgtggtatccactactggaagtcct
agtttaaaggaaaacattggagcagtatttgggcaaaaacagttgcagagccttatgcct
tttgttcagctacctcctaatgaagctgtttgtgaagaatatggactcaacgctactgac
atgccacaaaatctttatagtattacaggctttgtttctcgttgtgatcacggtgttgga
agaagtacaacagacagacagtttttctttatcaaccaacgtccatgtgatccagcaaag
gttgtcaagcttgtgaatgaagtttatcacgtatacaataaacaccagtatccatttgtt
gtccttaacatttgtgtagattcggagtgtgttgacatcaatgtaactccagacaaaaga
caaattttacttcaggaggaaaagcttttattagcaattttaaaaacttctctgatggag
atgtttggtagtgatgttaacaaactgaatgtcaatcagaaacttctggacattgcaggc
aacttgaagaagacacttcctgaagagacagaaaagcctcgggtagaaatgctgcctgac
tctgaggctgaaaatccaagtggtgaaggaaaaagaataatgactcttgccagattaagg
gagtcgttctctctccatcaaacaacagggagtaattttcaaagccctaaaaaggtaaaa
cagcagcacagctcccctagacaaatgtcactagttaccacttttggtactgtaaagact
caaaaggctgtcttcagtaaggattctgaaagttgtcataagatggactcaaagatgtca
attccaagcagacatctgagaaaactagaagattctgaattctgtagtacttctgagtca
gatgccggatgtagtacaccagaagctgggagctgtgtcaatagcaaaagtgtaattaat
ccttcggaagaagaattctgtagctcagaagaacaacttcaaaatgaatgtcctacaact
gttggatgtagtgagaaatcattggaatgtgatgttcaggtcttgggcactgaacatgag
ttaaatcaagtgaatgactggagtaatcaaaataagttatctcaagaagccagtagttct
tccccaagagtaaaacgttttaaaagcagaagctttaaaagtgaagcagatgacttaaag
gcaggtaaatgtcctgaagtgaagaacactaggaactatatgccaagtgttgatgtactg
gtggaagttaaaaagaaaaccgtgccacttgaattctctatgaaggttttagcagaaaag
gtaaaaaaggtaatacagcaacaacagaaaagtacagaaacacaaaattacagaagattt
aaagcaaaaattagtcctggagaaaacaaagtagcagaagatgaattaagaaaagagatc
agtaaagaaatgtttgcaaaaatggaaatcattggccagttcaatttagggtttataata
gcaaagttgaattctgatcttttcataattgaccaacacgctactgatgagaaatacaac
tttgagatgttacaacaacatactgttcttcaaggacagaagctgatagtgcctcaaaat
ctcaatttaacagctgtaaatgaaactgtattgattgaaaacctggaaatattcagaaaa
aatgggtttgattttgtcataaatgaaaatgctcctgtaactcaaagagttaaactgatc
tcattgccaacaagcaaaaactggacttttggtccacaagacatagacgagctgatcttc
atgttaagtgactgccctggagtcatgtgtaggccctccagggtcagacagatgtttgct
tctcgagcttgcagaaagtctgtgatgattggaactgcactgaatgtgcaggaaatgaga
aaattgatcacccatatgggtgagattgagcatccctggaactgcccccatggaaggcct
actatgagacacatagtcagtttagacttgatttcaccagaataa
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