Mycteria americana (wood stork): 142416134
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Entry
142416134 CDS
T11228
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142416134 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mame01001
]
142416134 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mame04054
]
142416134 (CIITA)
Enzymes [BR:
mame01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
142416134 (CIITA)
Protein kinases [BR:
mame01001
]
Serine/threonine kinases: Other
TAF1 family
142416134 (CIITA)
Pattern recognition receptors [BR:
mame04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
142416134 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_14
LRR_9
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_22
AAA_16
AAA_19
Motif
Other DBs
NCBI-GeneID:
142416134
NCBI-ProteinID:
XP_075371390
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All DBs
Position
12:complement(13083862..13128716)
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AA seq
1212 aa
AA seq
DB search
MKVVFRFCSDLLQTSSDAGMNLFKEILPRVRKILSTATASDDHTLLNLMLKEDVISKEYH
QALLHEKDREDLARKISLIFVEKWDLYLNILVPLCCLNLYGSKPQNMTDNEPTGSKYISD
NKRQIMDSAFASENGYLDLLHSDIDPLHLYTLLDPKSSGNEEGDFSADPEVDASNYDQFN
NIDFLCTMEDGEKEDELYLCSNTIEAYARIAELAEYVLKDQQEKQVEDTFAGNLILDEMA
AENTEKFTDIKMQKCHKRTFLGSAESCSDASEPKYKKIVEVPAVSAGNGSFLAMPLNSHP
ASSTSLTNQHMSFSVPATNVFERSFIIPGSSAPLNPGCLPVCAKGSQENTGFADPPQQIL
NFVHGNGTSDVIIYPEMLKEVQVPIIPSEERFKRPKPVEAFRTSLMDYFQDVCKSVSMER
EVTLDRLFIDGTLLQSQTETKTGKNSVKAMEKDLVTCSLQGKEKAALKRSQIFQILGGKD
LETKVIVVLGKAGMGKSILVQKICQDWSNGEFSQFEFVFWFDCKQISLPEKRYSLRDLLL
EFFVKPQEGSKEIFEYILQNPTKVLLVFDGFEGLHDHENFPRCSARQPEKDLCSIKELLS
GLIQKKILNGCTLLLTARPKDKVYQYVSKVDKTIEIVGFSPQQRELYITKYFEGLPYCDN
ALKLIKEREYLFSHCYSPVMCRFVCFLCETVLEMGDKSLPSTLTTVFLKFVQQKIISMQT
DVTAMQNQDSLATLARIAWYLGEKHQSAMKSDDLPSKEVKEFALKYGFFLPFAFPRHSDG
GEEEFGSTFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKKPFNWLDLVPRFLAG
LLFLQDDPYFCSLSNKDVKQSTKKQKTLLKYIRRLPINELCLERLLELLHCIYETQSNYL
LQHVALRLKPDLSFLGVVLTPPDVHVLHCILKRSRKEFSLDLRNSSIDMQGLKDLVGLKN
VASFRASLSDTVRLWKSLEQTKDYELLRTSTEKFVLDPFKAKTMKDVSDLSDLVEMQEKM
INCVQDASGCSSYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQHLDLDALSE
NGLGDEGAKTLSEVFPTLRSLETLNLSQNKITDVGAEKLATALPSLSSLKTLSLYNNSIC
DFGAENLAKVLPAMGSLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNLVMWNPTIPYGVL
EHLQQLDSRISV
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtgttcagattttgctcagacctccttcaaacgtcttcagatgcaggtatg
aatctctttaaggagatcctgcctagagtaaggaagattctttcaactgcaacagcttct
gatgaccacacattgcttaacctcatgctgaaagaagatgtgatatccaaggagtaccat
caagccttgctccacgaaaaagacagagaggacctcgcaaggaagatatctctgatattt
gtggaaaaatgggacctgtacttgaacattttggttcccctctgttgtttaaacctctat
ggcagtaagcctcaaaacatgacagataatgagccaacaggaagcaagtacatttctgac
aacaagagacaaatcatggattcagcatttgcgtctgaaaatggctatcttgatttgctg
cacagtgatattgatccattgcatctgtatactctccttgatcctaagtcatctggaaat
gaagaaggtgacttctctgcagatcctgaagttgatgccagcaactatgatcagttcaat
aatatagatttcctgtgtacgatggaagatggtgaaaaagaggatgaattgtatctctgt
tccaataccatagaagcttatgctagaatagctgaattagcagaatatgtgctcaaagat
cagcaggagaagcaggtggaagacacttttgcagggaaccttattttggatgaaatggct
gctgaaaacactgagaaatttactgacataaagatgcaaaaatgtcacaaacgaaccttc
ttaggctctgcagagagttgctctgatgcttcagaacccaaatacaagaaaattgtggaa
gtccctgcagtgtctgcagggaatggcagtttcttagctatgcctctcaacagccatcca
gctagctccacctcactaactaaccagcacatgtccttttctgttcctgctaccaatgtg
ttcgaaagaagtttcataattcctggatcttcagcacctttgaatccagggtgtctacct
gtctgcgcgaaagggagccaagagaatacaggctttgcagatcctcctcagcagatactt
aactttgttcatggaaatggcacatctgatgttataatatatccagaaatgctcaaagaa
gtccaagttcccataattccttctgaagaacgtttcaaaagaccaaagccagtggaagct
ttccgtacatcacttatggattatttccaagatgtatgcaaatctgtgtccatggagcgt
gaagtaactcttgatcgcctgtttattgatgggacgcttcttcaaagccaaactgaaacc
aagactgggaagaatagtgtaaaagcaatggaaaaggatctggtaacttgcagtctgcaa
gggaaggaaaaggcagcccttaaaagaagccaaatatttcaaatcctgggaggtaaagac
ttagagactaaagtgattgtggtgctgggaaaagcaggaatgggcaaaagcattcttgtt
cagaagatctgccaggactggtccaatggagagttttctcaatttgaatttgtattttgg
tttgactgcaaacaaataagcttgcctgagaaacgatacagcctgagggatctgcttctt
gaattttttgtaaaacctcaagagggaagcaaagagatctttgagtatatattgcaaaat
cctactaaagtccttttggtttttgatggttttgaagggttgcacgatcatgagaatttt
cctcgttgctcagccaggcagcctgaaaaagacttgtgcagtataaaggagctgctttca
ggacttatccaaaaaaagatactcaatggttgtactttattacttacagcaagaccaaaa
gacaaggtgtaccagtatgtgtccaaagtggataagactattgaaatagtaggattttcc
cctcagcagagagaattgtacataaccaaatactttgaaggattaccctactgtgataat
gcactgaaattaatcaaagagcgtgagtacttgttcagtcattgttacagccctgttatg
tgtagatttgtttgttttctctgtgaaacagtacttgaaatgggagacaaaagccttcct
tcaactcttactacagtcttcctgaaatttgttcagcaaaagataatatctatgcaaaca
gatgttacagccatgcaaaatcaagacagtcttgctacactagcccgtatagcctggtat
cttggagaaaagcaccaaagtgccatgaaaagtgatgatcttccttcgaaggaagttaaa
gagtttgctctgaaatatggatttttcctgccatttgcattccccagacattcagatggt
ggagaagaggaatttgggagcacattctctgattttgtcattcagaatttcttgggtgcg
cttcaccttatgttagcagaagagatcaaggacaaaagtctaacaaagtacctgtctttt
ccatccaagaagaaaaaaccttttaactggttagatttagtgcctcgatttttggctgga
ttgttgttcctccaggatgacccctacttctgctccctttcaaataaggatgtaaaacag
tcaaccaagaagcagaaaacactcttgaaatatattagaaggctgccgataaatgagctc
tgtctggagaggttacttgagcttttacattgtatttatgaaacacaaagcaattatctt
ttgcagcatgtggccttaaggctcaagccagacctgtcttttctgggcgtagttcttaca
ccacctgatgtccatgtactgcactgtattttaaaaaggtcaagaaaagagttttccttg
gatttgcgaaacagcagcattgacatgcaagggctaaaagacttggttggcctaaagaat
gtggcatcgttcagggcctccctcagtgatacagtcaggctctggaagtctttagaacaa
acaaaagactacgaactgctgagaacatcaacagagaaatttgttcttgatccctttaag
gcaaagacaatgaaggacgtcagtgacctttcagacctcgtagagatgcaggagaagatg
atcaattgtgtgcaagatgcatctggttgcagcagctatgaaattcctgccatcaaaaac
ctcagaaaactagaatttgcgctgggtccagtgtgtggcctacagggattcctaaaactt
gtggaaattcttgcagcatttccatcacttcagcatttagaccttgatgctctgagtgaa
aacggcctaggagatgaaggagcaaagactctatctgaagtctttccaaccctgagatca
ctggaaacgttaaacttatcacagaataagataacagatgtgggtgcggagaaactagct
acagctcttccttccttgtcttcgttaaagacactaagcttatacaataatagcatttgt
gattttggagcagaaaatcttgcaaaagttcttcctgcgatgggatctttaagagtgcta
gatgttcagtataacaaaataactggtgttggagcccagcagctgactgacagcctacga
aaatgtccccatataaagaacttggtgatgtggaatcccaccattccctatggagttctc
gaacaccttcagcagctggactctaggatcagtgtgtag
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