Mycteria americana (wood stork): 142416556
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Entry
142416556 CDS
T11228
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03440
Homologous recombination
mame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142416556 (TOP3B)
03460 Fanconi anemia pathway
142416556 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mame03032
]
142416556 (TOP3B)
03400 DNA repair and recombination proteins [BR:
mame03400
]
142416556 (TOP3B)
Enzymes [BR:
mame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
142416556 (TOP3B)
DNA replication proteins [BR:
mame03032
]
Eukaryotic type
DNA Topoisomerases
142416556 (TOP3B)
DNA repair and recombination proteins [BR:
mame03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
142416556 (TOP3B)
FA (Fanconi anemia) pathway
142416556 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
142416556
NCBI-ProteinID:
XP_075372364
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Position
13:complement(18101081..18115847)
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AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYAGSFIGQSAHFKMTSVCGH
VMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDAVLPVMNKPRSTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVNPEKESSLTLDWDRVRVFDREIAQMFLSITKMAKEAKVESVSKKEKVKQRPLA
LNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANN
PYWAETVKALLSEGVNRPRKGHDAGDHPPITPMRAATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTISFSIGPERFTCIGKVVTSPGFTAIMPWHSIPLEESLPHCEKGDLFPIGE
IKLLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDLCDAALVD
VDFNKAKSPLPGDETQHSGCIFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRR
PGGRLNSKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgttttaatggtcgcggagaagccttctctggctcagtccatcgccaagatc
ctctcgaggggaaacatgtcatctcgcaagggactgaatggtgcatgctctgtgcacgag
tacgctggatcgtttataggacagagtgcccatttcaagatgacatccgtgtgtggtcat
gtcatgactttggattttataggaaaatataacagctgggacaaagtggatccagcagaa
ctctttagcaaagctcccacagaaaagaaagaagctaatcccaaactgaccatggtgaag
tttttacaggtggaaggaagaggctgtgattgtattgtcttgtggttggattgtgataag
gagggagaaaacatctgttttgaagttcttgatgctgttcttcctgtaatgaacaaacct
cgtagcaccgaaaggacgatttatagagctaaattcagttctattactgacacagacatc
tgcaatgccatgaatcacttgggagaacccaatcgcaatgaagctctttcagtggatgcc
cgccaggagctggatcttagaattggctgtgcgtttacaaggtttcagactaaatatttt
caggggaaatacgggaatttagacagctccctcatctcctttgggccgtgtcagacccca
acacttggattctgtgttgaaaggcatgacaaaatccagtcatttaagcctgagacttac
tgggtgttgcaagctaaagtgaaccctgaaaaagaaagttctctcactttggattgggat
agagtgagggtgtttgatcgtgaaattgctcaaatgttcctgagtataacaaagatggca
aaagaagcaaaggtagaatctgtgagtaaaaaagagaaggtgaagcagagaccactggct
ctgaacacggtagaaatgctacgagtggccagtgctgctttaggaatgggtccacaacat
gccatgcaaatagcagagcgtctttatactcagggttatattagctaccctcgaacagaa
actacccattatccagaaaactttgacttgaaaggatgtttgagacaacaagccaataat
ccttactgggcagaaactgtaaaagcattgctatcggaaggcgttaatcgtccaaggaaa
ggccatgatgcaggagaccatcctcccatcactccaatgagagctgcaacagaagcagaa
ttaggtggagatggatggcgactatatgagtatataaccaggcatttcattgccactgtc
agcgctgattgcaagtacctgcaaaccaccatttctttcagtattggccctgaacgtttt
acctgtatcggaaaagtggtaacttcaccagggttcacagcaattatgccgtggcacagc
atcccattagaagagagccttccccactgtgagaaaggagatctttttccaattggtgaa
ataaaattgctggaaaagcaaaccagtcctcctgattacctgacagaagcagaacttatc
actctgatggaaaagcatggcattggaactgatgcaagtattccggtccacattaacaac
atttgccagcgaaactacgtcacagtggagagtggtcggagactaaagcctacaaacctt
ggcattgttctggttcatggttattacaaaatagatgcagaattggttcttcctacgatc
cgcagtgctgtagagaagcaactcaacttaatagctctgggtaaagcaaattatcaccag
gtcctggagcacacccttgacattttcaaaaggaaatttcactattttgtggattctatt
gcaggtatggatgagcttatggaagtgtctttttcgcccttagctgccacaggtaaacct
ctttcccgctgtggtaaatgccatcgtttcatgaagtatattcaggccaaacccagtcgt
ctgcactgctctcactgtgatgacacctacagtctcccacagaatggaaccattaaactc
tacaaagagttgcgttgccccctagatgactttgagctggtgctgtggtcgtctggatcc
agaggaaagagctacccactctgtccatactgttacaaccatcctcccttcagggacatg
aaaaaaggaatgggctgtaatgaatgcacccaccccacgtgccagcattcccttagcatg
cttggaattgggcagtgcgttgaatgtgagaatggggttctggtgctagactcgacgtca
ggtcccaagtggaagatggcatgcaacaaatgcaatgtgattgtgcacttctttgagaat
gcccacaaagtccgagtgtcaccggagacctgcgacttgtgtgatgcagcccttgtggac
gtagattttaacaaagccaaatctcctctacctggtgatgagacccagcattcaggctgc
atattctgtgatcctgtgtttcaagatctggtggagctgaaacatgcagccatgaggcac
cccatgcaccgtgggggacaaggaaaaaggcaaggtcggggaagaggtaaaggccggagg
cctggaggaagactcaattcaaagaaacccaaggacaaaatggcagctctggctgcttac
tttgtataa
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