Mycteria americana (wood stork): 142416610
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Entry
142416610 CDS
T11228
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
mame Mycteria americana (wood stork)
Pathway
mame03030
DNA replication
mame03410
Base excision repair
mame03420
Nucleotide excision repair
mame03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142416610 (RFC5)
03410 Base excision repair
142416610 (RFC5)
03420 Nucleotide excision repair
142416610 (RFC5)
03430 Mismatch repair
142416610 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mame03032
]
142416610 (RFC5)
03036 Chromosome and associated proteins [BR:
mame03036
]
142416610 (RFC5)
03400 DNA repair and recombination proteins [BR:
mame03400
]
142416610 (RFC5)
DNA replication proteins [BR:
mame03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
142416610 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
142416610 (RFC5)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
142416610 (RFC5)
DNA repair and recombination proteins [BR:
mame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
142416610 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
142416610 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_16
AAA_24
AAA_11
AAA_lid_RFC1
AAA_assoc_2
nSTAND_NTPase5
AAA_14
DEAD
ResIII
DUF815
RuvB_N
AAA_5
AAA_30
AAA_19
PhoH
TniB
TIP49
AAA_7
DNAX_ATPase_lid
ATPase_2
nSTAND3
Thioredoxin_6
IstB_IS21
bpMoxR
AAA_28
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
142416610
NCBI-ProteinID:
XP_075372480
LinkDB
All DBs
Position
13:complement(3628263..3631151)
Genome browser
AA seq
329 aa
AA seq
DB search
MARAGGGNLPWVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACAKQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLRHVIQ
EEGVDVSEDGMKALVTLSSGDMRRALNILQSTTMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKITELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYR
LAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggcgggtggcgggaacctgccgtgggtggagaagtaccggccgcaggcgctg
tcggagctggtgtctcaccgggatatcctcagcaccgtgcagcggttcatcagcgaggat
cggctcccgcatcttctcctctacggtcctcccggtaccggtaagacctcgaccatcctc
gcctgcgccaagcagctctaccgggagcgggagtttggctccatggtgctggagctcaac
gcctccgatgaccggggcatcgacatcgtccgagggcccatcctgagcttcgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagccgacgccatgacc
caggatgctcagaacgccctcaggcgagtgatcgagaagttcacagaaaacacccgcttt
tgcctcatctgcaactacctctccaagatcatccccgccttgcagtcccgctgcacgcgc
ttccgcttcggccccctcaccccggagctgatggtgccccggctgcggcacgtcatacag
gaggagggggtggacgtgagtgaggacgggatgaaggctctggtgaccctctcgagcggt
gacatgcgcagagccctcaatatcttgcagagcaccaccatggccttcgggaaggtgacg
gaggagaacgtctacacctgcacgggacaccccctcaagtctgacattgccaacatcctc
gactggatgctgaaccaggacttttccaccgcctatcgcaaaatcacagagctgaagacg
ctgaagggcttggccctgcaggacatcctcaccgagatccacctgtttgtgcacagagtt
gatttcccaccctcggtccgcattcagctgctgatcaaaatggcagacatcgagtaccgg
ctggctgctgggaccagcgagaagattcagctgagctccctcatcgcggctttccaagtc
accagggacctgatcgtggccgaagcctga
DBGET
integrated database retrieval system
