KEGG   Mycteria americana (wood stork): 142416866
Entry
142416866         CDS       T11228                                 
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
  KO
K24357  collagen type XX alpha
Organism
mame  Mycteria americana (wood stork)
SSDB
Motif
Pfam: fn3 VWA Collagen Ig_DSCAM-DSCAML_C Pur_ac_phosph_N VWA_2 FN3_Tor_3rd CBM_4_9 DUF4998
Other DBs
NCBI-GeneID: 142416866
NCBI-ProteinID: XP_075373068
LinkDB
Position
14:15964738..16021031
AA seq 1725 aa
MLIHTCFFFACLPVASHVWGRAGQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSGAASGKNLTSLGTSAAEHREVAEATPPPLNAVLTQPAKDRAEKKRQKGTQPKGS
GETTRNQPSAEASATEATPTTTRSSQRAPANSERESPGKEKPTKDSLRRGSQFQCDTSAM
TDIVLLVDGSWSIGRNNFKLIKEFLSNLISPFSIAQDKIRVGLSQYSSDPRTEWDLSAYS
TRDQVLEAVRSLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGRLTRVLCT
RIKEKSNKENAGSTVKDIPVNTGPQLSPTDLKISAVTSKSMHLTWSPPLRPPKKYRIVYY
PSKGGIPKEVVLDGAVSSLRLSNLTSHTEYLVSVFPIYDTVVGDGLRGVTSTLPLPSPRS
LRISELSHNSIRLSWKAAQGATQYLVLCSAAPSGAEDYTTEVKVAQPEVLLDGLLPSTEY
SVAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVKAHRVTYV
SSRGSNTGEVDVPGTATSTVLRPLSSLTQYFISVRSTYDEGDSFPITGNVTTLKVPPPQA
LKVTELSGNSLRLQWEAVAASDVVVYQIKWSTVGGEKPQELSVAGNVATAVLPGLQKNTD
YKISIWAYYKDGARSDTVSVQHRTNSRSPPTNLFIDSETPTSFQVHWTPPDGRIQHYKIT
YNPVSDAAAQQTIMASGKSSSVTLQSLLPDRAYKVIVSAIHYTGESESTSTTGRTAPVLS
KFPSIRGFVPSKTEACPTISSSEGSVRGFDMMEAFGLVEKEYASIKGVAMEPFVFSGSRT
FTLFRDTQLTQRTSDVHLFAIPPEHTISILLRLLPETPKEPFAVWQITDEDFQPLLGVNL
DPGKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFKIKLYLDCKKIAEK
PINTVGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLQIMCSSVGAEDDRCCDLPALRDE
ETCPTLAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPSG
QQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGT
AGPPGPPGPRGFQGVAGSRGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIFQLVS
QACERMIQTHVLKFDSFIHEHAKKPVPVWEERLKPGEPGPPGPPGPPGSNGERGENGIPG
QPGKDGYPGERGAPGPKGEKGMPGASEEGIQGPRGRTGPPGEVVLGKPGPKGYPGNAGPQ
GSPGVRGQPGQSGYPGGCDISGCYGAGRRAKRKDFSGWRNTAALKVEAQGGSGDPAQPKL
QFPPLSCSWAREKEEEEVALNSHHGHGCSLAIRCPWPSNAQAQLFMELAQATYVFVSHTD
FKHLAGSVNTELRGAEEKLGEAQSPSAASLAFESCSHSRSWGKPVFLDYVCLSLHAVGLS
CLEEFLQPFQSVHLYQLTTDHILHRGWFVDAKPLYVLLEGTSSCSYIAEYMPMNATMLCT
DFNKNFSPKLDGGDENGLAKRCNLRKYSQRALEQLNRGHAVNYNP
NT seq 5178 nt   +upstreamnt  +downstreamnt
atgctgattcacacttgtttcttttttgcctgcctgcctgtggcgagccatgtctgggga
cgagcgggccaagggtcaggccggctgaaactcactgtcctttcagaagacaggctccaa
atgaaatggaaagagaccgaagggaacatcaatggctacaaagttcgggtaaagcccatg
gcaggggactcggagcaagaagtcatgctgaaaaccaaaactcccaaagccacagtgggg
gggctgagccctaccaaggaatacacgctgcaggtctacgtgctcaacggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggagctaaaaaatgcatcccagactaga
aataaccgaagaaactcaggagctgcatcaggaaagaatctcacctctttgggaacctca
gcagctgagcacagggaggtggcagaggccaccccaccacccctgaatgccgtcttgaca
cagccagcaaaggacagagctgaaaagaaaaggcagaaggggactcagccaaagggctca
ggagaaaccacaagaaaccagcccagcgcagaggccagcgcgacagaagcaacaccaaca
accacaagatcatcccagcgcgctcctgcaaactcggagcgagagtctccaggaaaagaa
aaacccacaaaggattcattgaggcgaggttcccagtttcagtgtgacacatctgcaatg
actgatatcgtcctgcttgtggatggatcctggagcatcggacgcaacaatttcaagctc
attaaggagtttctgagcaatttgatttccccattcagtatcgcccaagacaagataaga
gtagggctgtcccagtacagcagcgatccccgcacagagtgggatctgagcgcttactct
acgagggaccaggtcctggaggccgtgaggagtttgcggtacaagggcggcaacaccttt
acaggcctggcactgacccacgtcctggagcagaatctgaaaccagatgctggtgcccgg
ctggaggctgagaagttggtaatactcctgactgatggaaaatcccaggatgatgccaac
ctggctgctcagacattgaaaaacctgggcatagagatatttgccattggggtgaagaac
gcggacgaggcagagctgaagcaggtggcctcggagccgctggagctcacggtgtacaac
gtgctggatttcccactgctgagctctctggttggcaggctcactcgggtcctgtgcacc
aggatcaaagagaagagcaacaaggaaaatgcaggcagcactgtgaaagatatccctgtg
aacacgggtccccagctgagcccaactgaccttaaaatatcagctgtgacctctaagagc
atgcacttgacctggagtcctcctctgagaccacccaagaaatatcggattgtgtattat
ccatctaagggtggtatccccaaagaggtggttttagatggagcagtctcctctttgcgg
ctttccaatttgacctcgcacacggagtacctggtgtcggtgtttcctatttatgacaca
gttgttggggatgggctgagaggcgtcacctccacattgcctttgccttcccctcgctcc
ctgcgcatctctgagctgagccacaacagtatcaggctgagctggaaggcagcccaggga
gccacgcagtacctggtgctctgctccgcagcccccagtggagcagaggactatacgaca
gaggtgaaggtggcccagcctgaggtcctgctggatgggctgttgcccagcacggagtac
tctgtcgcggtgtatgcgatgtatggggaagatgcgagtgatccagccagcatccaggaa
accaccttggccttgagtcctcccagatacctgagcttctctgagctcagccacgcgtcc
gttcgagtcagctgggaggctgcgtctccggctgtgaaagctcaccgtgtcacctatgtt
tctagcagagggagcaacactggggaggtagatgttcctggcactgcaacatccactgtc
ctgagacctttgtcctccctcacccaatacttcatcagtgtccgatctacgtatgatgaa
ggagactcctttccaattactggcaatgttaccaccttaaaggtccccccgccgcaagca
ctgaaggttaccgagctctccgggaacagcctccgactgcagtgggaagctgtcgctgcc
tctgatgtggttgtctatcagatcaaatggagcacagtcggtggagagaagcctcaggag
ctctccgttgctggaaatgtggcaactgctgtcctgccaggtttgcagaagaacactgac
tataaaatatccatctgggcctattacaaagatggtgctcgaagtgacacagtttctgtt
cagcacaggaccaattcccggagcccacccaccaacctcttcatcgactccgagaccccc
accagcttccaggtccactggacccccccggacggccgcatacagcactacaaaatcacc
tacaaccctgtttctgatgccgctgctcagcaaacaatcatggcttctggcaaaagcagc
agcgtgaccctgcagtctctgctgcctgatcgagcctacaaggtgattgtttctgccatc
cactacacgggagagagcgagagcacgtcgacaacaggccggacggctcctgtgttgtct
aaattcccttcaatacgaggatttgttccatctaaaacagaggcctgccccaccatcagc
tcttccgaaggctccgtacgagggtttgatatgatggaagcttttggcttagtagagaag
gaatacgcctccattaaaggtgtagccatggagccattcgtattcagtgggtcccgtacc
ttcaccctgttcagggacactcagctcacccagaggaccagcgatgtccacctctttgca
atcccacccgagcacaccatcagcatcctcctgcgcctcctgcccgaaacccccaaggag
cccttcgctgtgtggcaaataacagacgaggacttccagccccttcttggtgttaacctt
gaccccggtaagaaatccttgacctatttcaatcatgactacaaggctgatttacaggaa
gtctcctttgaccagcaggaagtgaagaagatattctacgggagctttcataaggtgcac
gtggccgtgagccacttcaagatcaaactctacctggactgtaagaaaatagcagagaaa
cctatcaacaccgtcggcagcatctccaccgctggcttcatcatgttgggaaaagtgaca
aggaccagaggacccaggagcgggtccgcatcgttccagctgcagtctttgcagatcatg
tgcagcagcgtaggggcagaggacgacagatgctgtgatctccctgcactgagggatgag
gagacctgccctaccttagctcctgcctgctcttgtacttctggccgcccgggcttgcca
ggacctccagggccccctggcagccctgggaggagaggaccgcaaggggagcagggcgag
ccaggacccaagggtgaaccaggcccacctggacaagtagggccagagggtcctagtggc
cagcaaggctctccaggttcccaaggaatcacggttcagggtcctgtgggaccaccagga
attaaaggagagaaaggagacactggaagtcctggcatgcagggcattcctggtgtgcag
ggagctccaggcagggatggtcttcaaggtgcaaagggggtaaggggactagaaggcaca
gctgggcctccaggacctcctggaccaaggggtttccaaggagtggcaggctcccgaggc
agcagtggagagaagggacctccgggtgacgttgggccaacagggctgccaggtccaaaa
ggagaaagaggagagaaaggggaaccacagtccttggccacaattttccagctcgttagc
caggcttgtgagcggatgattcagactcatgtgttgaaatttgactcattcattcatgaa
catgcaaagaagccagttcctgtttgggaagaaaggttaaaaccaggagaaccaggacca
ccaggtcctccaggtccccctgggagcaatggagaaagaggagaaaatggcatccctgga
cagccaggcaaagatgggtatcctggagaacgaggtgctccaggacccaagggagaaaaa
gggatgcctggagccagtgaggaagggatccaaggacccagaggcagaacaggcccacca
ggagaagttgtgctggggaaaccaggtccgaagggttaccctggaaatgctggtcctcaa
ggttctcctggtgtcagaggacagcctgggcagtctggatatccaggaggttgtgatatc
tctggatgttatggggcaggtaggagagcaaaaagaaaagatttcagcggttggaggaac
acagcagccctaaaggtggaggcgcagggaggctcaggagaccctgcccagcccaagttg
cagttccctcctctgtcatgctcatgggctcgggagaaggaggaggaggaggtagctctg
aacagccatcacgggcatggctgcagtctggcgataaggtgcccctggcccagcaatgcc
caggcacagctcttcatggaactggcccaagccacgtatgtttttgtgagccatacagat
tttaagcacttggctgggtctgtgaacacggagctgaggggtgcggaggagaagctcggt
gaagcccagagcccctcagctgccagcctggcctttgagtcatgcagtcacagcaggtcc
tgggggaagcctgtatttttagactacgtctgcctttccttgcacgccgtggggctgagc
tgccttgaggaattccttcagcctttccagtctgtccatctttaccagctgaccacagac
cacatcctacacaggggctggtttgtagatgcgaagcctctttatgtgctgcttgaggga
acaagctcgtgttcttacattgctgagtatatgccaatgaatgccaccatgctatgtaca
gactttaataagaacttttcccctaaattagatggaggagatgaaaatggcttggcaaaa
cgatgcaacctcagaaagtattcccagagagctctggagcaactcaaccgcggacacgca
gtgaactacaatccatag

DBGET integrated database retrieval system