Mycteria americana (wood stork): 142417308
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Entry
142417308 CDS
T11228
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
mame Mycteria americana (wood stork)
Pathway
mame03030
DNA replication
mame03420
Nucleotide excision repair
mame03430
Mismatch repair
mame03440
Homologous recombination
mame03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
142417308 (RPA1)
03420 Nucleotide excision repair
142417308 (RPA1)
03430 Mismatch repair
142417308 (RPA1)
03440 Homologous recombination
142417308 (RPA1)
03460 Fanconi anemia pathway
142417308 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mame03000
]
142417308 (RPA1)
03032 DNA replication proteins [BR:
mame03032
]
142417308 (RPA1)
03400 DNA repair and recombination proteins [BR:
mame03400
]
142417308 (RPA1)
Transcription factors [BR:
mame03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
142417308 (RPA1)
DNA replication proteins [BR:
mame03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
142417308 (RPA1)
DNA repair and recombination proteins [BR:
mame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
142417308 (RPA1)
MMR (mismatch excision repair)
142417308 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
142417308 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
DUF4939
RADX
Motif
Other DBs
NCBI-GeneID:
142417308
NCBI-ProteinID:
XP_075373956
LinkDB
All DBs
Position
15:complement(6563739..6586621)
Genome browser
AA seq
616 aa
AA seq
DB search
MSVRLSEGAIAAIMQGQYVPKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAQCICQVNRFIVNSLKDGRRVVILMDLDVLKTADKVGGNIGNPVPYNEG
QGQQRSSAPAASPVPSKPQPQQQNDNASVAGPAAPKYHAPSNQFGKVSVPSSVKTPGGSQ
AKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSVELVDESGEIRATAFNDQ
ADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFE
FVPISDLENTPKDSVVDVIGICKSYEDVTKIIVKANNREVSKRNVHLMDMSGKLVTATLW
GNEAEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQL
LECASISDVRGGPASGANTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQAC
PSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILG
QNAAFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAVDVKPVNYRE
YSKRLIASIRRNAQLG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgagggcgccatcgcggccataatgcaggggcagtacgtcccc
aagcccgtgctgcaagtcatcaatacacgggctattgctacaggaaatgggccaccacgt
taccgagtgttgatgagtgatggggttaacacactttcctcattcatgttggcaacacag
ctgaactctctggtggaagaggaacgcttatcagcccaatgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatactgatggatttagatgtt
ctgaaaactgctgataaggttggtgggaatattggcaatccagtgccatacaatgaaggg
caagggcagcaacgttcttcagctccagcagcaagcccagtacccagcaaaccacagcca
cagcaacaaaatgacaatgcgtcagtagcaggtcctgctgctccaaaataccatgctccc
tcaaaccagtttggtaaagtgagtgttcccagctcagtgaagacaccagggggatcgcag
gccaaagtagtgccgatcgccagcttgaacccgtaccaatctaagtggaccatttgtgct
cgtgttacccaaaaaggccagatccgcacatggagcaactcccgtggtgaaggaaagctc
ttttctgtagagctagttgatgaaagcggtgagattagagctactgcattcaatgatcaa
gcagacaagttctttccactcattgaattgaacaaggtatattattttaccaaaggcaat
ttgaagactgctaacaagcaatatacagctgttaagaatgactatgagattacattcact
aatgagacttcagttgtgccctgtgatgatgcccagcatcttccatcggttcagtttgag
tttgtacccatctctgacttggagaacacacccaaagactcagttgttgatgtaattgga
atttgtaagagctatgaagatgtcactaaaattatagtgaaagctaacaatagggaggta
tcgaagaggaatgtgcatctgatggatatgtcagggaaactggtgacagctacgctatgg
ggaaatgaggctgaacagtttgatggttctagacaacctgtgatagccatcaaaggagcc
cgagtctctgattttggtggtagaagcctgtctgtcctgtcctcaagtacagttgtcatc
aaccctgatagcccagaggcttttaagctccgaggatggtttgactctgaggggcagctt
ctggaatgtgcctcgatctctgatgtgaggggtgggccagcatctggggcgaataccaat
tggaaaactttgtttgaagccaaatctgagaacttaggacaaggagataaggcagattat
tttagctgtgtgggcactgtcgtacatctgcgcaaagagaactgtatgtaccaggcatgt
ccctctcaggattgcaataagaaagtgatagaccaacaaaatggactgtatcgttgtgaa
aagtgtgatcgtgaattccccaacttcaagtaccgcatgatgcttctggtgaccattgca
gactgtctagagtatcagtgggtgacttgtttccaagagtcagcagaattcattcttggg
caaaacgcagctttcctgggagaactgaaggaaaagaatgagcaggcatttgaagaagtg
ttccaaaatgcaaacttcaacacgtatgagttcaggatccgagtaaaactggagacttac
aacgacgaatctcgtattaaggctacagcagtggacgtcaaacctgtcaactacagagaa
tacagcaagaggttgatcgcaagcatcaggagaaacgctcagctggggtga
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