Mycteria americana (wood stork): 142417461
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Entry
142417461 CDS
T11228
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
mame Mycteria americana (wood stork)
Pathway
mame04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
142417461 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mame04131
]
142417461 (SCARF1)
Membrane trafficking [BR:
mame04131
]
Endocytosis
Phagocytosis
Scavenger receptors
142417461 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
142417461
NCBI-ProteinID:
XP_075374339
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All DBs
Position
15:6681918..6688578
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AA seq
962 aa
AA seq
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MPSLGPPVSATGVAARAKNIPCGSIPCLPLPAAPLTSESGRLLPRFLRKKPKAGGRKRPH
HGRDWTDGTDGRRCGAGELPGLGPLCPAGMGSTRPILCLQLWLWVQSSAQELDPDGRNVC
RLPAGPACCPGWKREGRECMAALCEGENACGVDEVCVRPGVCLCKPGFFGADCSSPCPEQ
YWGPDCKRSCPCHPNGRCDPASGRCTCDPNHWGGLCQFPCQCGPHGHCDPLTGACRCEPG
WWAPTCKKQCQCNPATSHCDPLTGHCRCLPGWWGRRCSFKCSCNLSPCAQETGKCECKAG
FWGPACQRRCDCVHGSCSPLSGHCSCSPGYQGRSCRDSCPAGKYGSQCVHSCGSCKRSQP
CSPVDGFCLACQPGWNGTLCKEPCAPGFHGEDCLQPCPHCRRGEVCDPETGSCPHCEPGW
TGPSCNSSCPAGTFGDGCQLLCPECVAGSCDPVSGACICQAGYWGASCNDTCPEGYFGVN
CSSPCQCSRGTCHPVRGDCVLSFKDYGALAAAILVPLLLLLLCVTCCCCGAGPADARDRA
AVPDDDVVARMKHHVRGVLANLSAMMPCFSLGGYKLPKVTVSHHDTEMPFNPSFIEPPSA
AWVSDSSFSSSFDTDNEGPEYSVPPREGVLLLAGAELQDGVSPLGETLPDPSAFDSEDVS
QPFAIPRTSSIAKAKRPSVSFAEGTKFGAAETPSPGRKPKTPWGPSKLSPAPGDAAAEPP
TEQPASDCYESPEPLGKGEESHRPSPRATPGGRRRVVSGTRHVAQRVEALEAAAKSGSWE
AKGKEPNVTTIYMMVGTAGQDPKAEGGGEGPVQAVLKRLGSLQRGKWAAKEEPKVRRSVE
AIQKPPRRALAQCRDSVNSCKQRESVPGAPTELPPGKHQHLPGKRQSFLLASSSPKSTGA
QDGASNDVGATERGKSPELVLSLETKGQAAPEEEPKYENVISGSADSPPGPAKEPPAAPA
AT
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcctcggaccacccgtttctgctactggggtggcagcaagggccaaaaacatc
ccatgcggcagcattccctgcctccccctccctgccgcacccctgacgtctgaatcgggg
cgcctcctcccgcgtttcctcaggaagaaacccaaggctggcgggaggaagaggccgcac
cacgggagggactggacggacgggacagacggacgccggtgcggggctggggagctgccg
ggacttgggcccttgtgccccgccgggatggggagcacccggcccatcctctgcctccag
ctgtggctgtgggtgcagagctctgcccaggagctcgaccccgacggcaggaacgtctgc
aggctccccgccggcccagcgtgctgccccgggtggaagcgggaagggcgggagtgcatg
gccgcgctgtgcgagggggagaacgcctgcggggtggatgaggtgtgcgtgagacccgga
gtttgcctctgcaaacccggcttcttcggagcagactgcagttccccctgccccgagcag
tactggggccccgactgtaagcggagctgcccgtgccaccccaatgggcgctgtgacccg
gcgagcgggcgctgcacctgcgaccccaaccactggggagggctctgccagttcccttgc
cagtgcggcccccacggccactgcgaccccctcactggcgcctgccgctgcgagccgggc
tggtgggcacccacctgcaagaagcaatgtcagtgcaaccccgccacctcccactgcgac
ccgctcaccggccactgccgctgcctgccgggctggtggggcaggaggtgcagcttcaaa
tgctcctgcaacctctcgccctgcgcccaggagacgggcaagtgcgaatgcaaggctggg
ttttgggggccggcgtgccagcggcgctgcgactgcgtgcatggctcctgcagccccctc
agcgggcactgcagctgcagccccggctaccagggcaggagctgccgggactcctgtccg
gcggggaaatacgggtctcagtgtgtgcacagctgcgggagctgcaagcgcagccagccc
tgctcacccgtggacggcttctgcctggcctgccagcccggctggaacgggaccctctgc
aaggagccctgcgcgcccggcttccacggcgaggactgcctccagccatgtccccactgc
cggcgcggggaggtctgtgacccagagaccgggtcctgcccgcactgcgagcctggctgg
acgggacccagctgcaacagctcctgccctgcgggcaccttcggcgatggatgccagctc
ctctgccccgagtgcgttgcggggagctgtgaccccgtgtcaggagcttgcatctgccag
gcgggctactggggagccagctgcaacgacacctgcccggaggggtattttggcgtgaac
tgttcctcgccctgccagtgctcccgggggacctgccaccccgtgcggggtgactgcgtg
ttgagttttaaggactacggggccctggcagccgccatccttgtccctctcctgctgttg
ctgctctgcgtcacctgctgttgctgcggagctggcccagcggacgctagagacagggca
gccgtgccggatgacgatgttgtggcccggatgaagcaccacgtgcggggggtgctggcg
aacctcagcgctatgatgccttgcttttccctgggcggctacaaacttcccaaagtcaca
gtttcccaccacgacacggaaatgcccttcaaccccagcttcatcgagccgccgtcagcc
gcgtgggtttcagacagctccttctcctcctccttcgacaccgacaacgagggacccgag
tactccgtccctcccagagaaggcgtcctgctgctggcaggggccgagctgcaggacggg
gtgtcccctctcggtgagacgctcccggacccgtctgcctttgactccgaggacgtctcg
cagcccttcgccatcccccgcacctccagcattgccaaggccaagcggccctctgtgtcc
tttgctgaggggacgaaatttggggcggcggagacccccagccccgggcggaagcccaag
accccgtggggcccatccaagctgtccccggcgccaggggatgcggcagctgagcccccc
actgaacaaccagccagcgattgctatgagagccccgagccccttggcaagggggaggaa
agccaccggccatcgccccgggccaccccggggggacgccggcgggtggtctccggcacc
aggcatgtggcccagagagtggaggcgcttgaagcggctgcaaaatccggcagctgggag
gcgaaggggaaggagcccaacgtcaccaccatctacatgatggtgggaacggccgggcag
gaccccaaggcggaggggggtggtgagggaccagtccaagccgtgctcaagcggctgggc
agcttgcagaggggcaagtgggctgcaaaggaggagcccaaggtgaggaggagcgttgag
gccatccagaaaccaccccgccgggccctggcgcagtgcagagactcggtgaatagctgc
aagcagagggagagtgtcccaggagctcccaccgagctacctcctggcaagcaccagcat
ctccctgggaagagacagtccttccttcttgcatcttcctcgccaaaaagcaccggggcc
caggatggggccagcaatgatgtaggtgccacggagaggggcaaaagccctgagttagtc
ctcagcctcgaaacgaagggacaggctgccccggaggaagagccaaaatacgagaacgtg
atcagcggcagtgccgattcgccccccggccccgccaaggagccaccggccgcccctgca
gccacctga
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