Mycteria americana (wood stork): 142418094
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Entry
142418094 CDS
T11228
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
mame Mycteria americana (wood stork)
Pathway
mame04020
Calcium signaling pathway
mame04080
Neuroactive ligand-receptor interaction
mame04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
142418094 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
142418094 (GRIN1)
04082 Neuroactive ligand signaling
142418094 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mame04040
]
142418094 (GRIN1)
Ion channels [BR:
mame04040
]
Ligand-gated channels
Glutamate (ionotropic)
142418094 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Rap-GAP_dimer
DUF6724
Motif
Other DBs
NCBI-GeneID:
142418094
NCBI-ProteinID:
XP_075375574
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Position
17:complement(2132743..2171245)
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AA seq
986 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFR
SITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCT
ASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcctcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccatactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgacccc
ggaaccaaaaatgtgacgtcgctgctgctggaggctaaggagctggaggctcgcgtcatc
atcctttctgccagtgaggatgatgcggccacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctg
cgttacgcccctgatggagtgatcggtttgcagctcatcaacgggaagaacgagtcagcc
cacatcagcgacgctgtcgcagtggtggcccaggccgtgcatgacttgtttgagaaggag
aatatcacagacccgccgcggggctgcgtgggcaacaccaacatctggaagacgggaccc
cttttcaagagggtgttgatgtcctccaagtactcagagggtgtcactggacgggtggaa
ttcaatgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaatcgg
aaactggtccaagttgggatttacaatggcagccacgtcttgaccaatgaccggaagatt
atctggccagggggagaaacggagaagcctcaaggctatcagatgtcgaccaagttgaag
atcgtgacgatccaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggacg
tgcagggaagaattcaccatcaatggagaccctgtgaaaaaggtcttttgcactggaccc
aacgagaccatcccaggccgccccaccgtggcactctgctgctacggcttctgcatcgac
ctgctcatccggctggcaggggtgatgaacttcacctacgaggttcacctggtagctgat
ggtaaatttggtacccaagaacgggttaacaacagcaacaagaaggagtggaacgggatg
atgggggagctgctgagcggccaagcggacatgatcgtggctcccctcaccatcaacaat
gagcgggcacagtacattgagttctccaagcccttcaagtaccagggcctcaccatcctt
gtgaagaaggaaatcccccgcagcaccttggactcgttcatgcagcctttccagagcacg
ctttggctgctggtcgggctgtctgtgcacgtggtggcagtgatgttgtacctcttagac
cgattcagcccgtttggccggttcaaagtgaacagcgaggaggaggaggaagatgccctg
accctctcctcggccatgtggttctcctggggagtactgctgaactccggcatcggagaa
ggtgctccccggagtttctctgcccgtattcttggcatggtgtgggctggctttgctatg
atcattgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgag
gagagaattacgggcatcaacgacccccggctgcgcaacccctctgataagttcatctat
gccacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaagcacaactatgagagcgctgccgaagccatccaggcagtg
agggacaacaagctccatgccttcatctgggactcagcggtgctggagttcgaggcctcc
cagaagtgtgacctggtgacgacgggggagcttttcttccgctctggcttcgggattggg
atgcgcaaggacagcccgtggaagcagaacgtctccctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaagagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccc
tgcagaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagc
cctgggaagctaccaccccactctgaacgtcctagcgcccaccatcacccgagctgcaca
gcctctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccatagg
cagctcctgcaactcgaatag
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