Mycteria americana (wood stork): 142418645
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Entry
142418645 CDS
T11228
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mame04515
]
142418645 (CLSTN1)
Cell adhesion molecules [BR:
mame04515
]
Cadherins
Cadherin related
142418645 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
PFF1_TM
SID-1_RNA_chan
Cadherin_C_2
Neur_chan_memb
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
142418645
NCBI-ProteinID:
XP_075376897
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All DBs
Position
18:6420304..6460935
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AA seq
982 aa
AA seq
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MPPPRRPGMPRSLPAPASCLLLAALLCGGAGAARVNKHKPWIETTYHGIVTENDNTVLLD
PPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKL
DCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEG
KRYDNILKVEAVDADCSPQFSQICNYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLT
VTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGALALFPSMRLETCDEPI
TSIQATVELETNHIGKGCDRDTYSEKSIHRLCGASSGTAELLPPPSSAANWTIGLPTDNG
HDSDQVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRH
HYTLYVHNCRLVFLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVLNVEFPAVTLYVDG
VSYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGN
LAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSTLTLEGDDIDRV
DKAMQHISYLNSRQFPTPGIRRLKITTVVKCFNEEACVSIPSVEGYVMVLQPEEPKISLS
GINHFARSASEFESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLD
TCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMASYEEVLHLIHYR
NWHTVSLFDRKFKLVCSELNGRYVSNEFKVEVNVIHTANPVEHANHIAAQPQFVHPVHHT
FVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKE
NEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQ
EEDQQNVNRQQQLEWDDSTLSY
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcgccgcccgggcatgccgcgctcgctgccggcccccgcctcctgcctg
ctgctcgccgcgctgctctgcggaggagcaggggccgctcgagttaacaagcataagcca
tggattgaaaccacctatcatggtatagttacagaaaacgacaacacggtgctcttggac
ccccctttaatagccctggacaaagatgcgcctctgcgttttgcagagagttttgaggtg
acagtcaccaaagaaggtgagatttgtggatttaaaattcacgggcaaaatgttcccttt
gaagcagtggtagtggataaatccactggtgagggaataatacggtctaaagaaaagctt
gactgtgaactacagaaggactacacattcaccatacaggcctacgactgtggaaaggga
ccagatggagcgaacgcaaaaaaatcccacaaagcaacagtacatattcaggtgaacgat
gtcaatgagtatgctcctgtcttcaaagagaagtcgtacaaggcaacagttattgaaggg
aagaggtatgacaacatcctgaaagtggaagcagtggatgcagattgttcacctcagttc
agccagatttgcaattatgaaattgtaactccggatgtaccttttgctattgacaaagat
ggttatataaaaaacacagaaaagttaaactatggtaaagaacatcagtataaactgaca
gtaacagcgtatgactgtgggaagaagagagctgctgaggatgtgttggttaaaattagc
attaagcctacatgcaagcctggctggcaaggttggagcaaaagaatagaatatgagcct
ggtactggtgcgctagcgctcttccccagtatgcgtttggagacgtgtgatgagccaata
acctcaattcaagcaacagttgaactagaaaccaaccatattggtaaaggctgtgataga
gacacctactctgagaaatccattcacagactctgtggtgcttcttctggcacagctgag
ctacttccccctccaagcagtgctgctaactggacaataggacttcctactgataatggt
catgacagtgaccaagtctttgaatttaatggcacgcaagctgtgaagattccagatggc
gttgtcacagtcaatctaaaagagcccttcatgatttcagtgtggatgaggcatgggcct
ggcaccaaagagaaagagacgattctgtgcaattcagacaagacagatatgaaccggcac
cactacacactctatgtacacaactgccgacttgttttcctcttccgccaagatccttca
gagggaaaaacatacaaacctgctgaatttcactggaaactaaatcaagtgtgtgacaaa
gagtggcatcattacgtcctcaatgttgaatttcctgcggtaactctttatgtagacggt
gtttcatacgatcctttcccagtgactgaagattacccgcttcatccttcaaagatagaa
acacagctagtagttggagcatgttggcaagaatatacaggaaatgaaaatgacaatgaa
actgtgcctgagacctctgcaggtggtgaactccacatggctcagtttttccgaggcaat
ctggcaggtttgatgattcgttctgggaaactggaaaacaagaaagtgatagattgccta
tatacttgcaaagagggactggacttacaaatggctgatggcgttggcaaaggcgtgaag
atccacatgaatccaagtcagtcaacactgaccttagaaggggatgatatcgacagagtt
gataaggccatgcaacacatttcctatctgaattcccgccagttcccaacacctgggatt
cggaggcttaaaatcaccactgttgtcaagtgtttcaatgaagaggcctgcgtctccatt
ccttctgtggagggatatgtaatggtcttgcagccagaggaaccaaaaatcagccttagt
ggcatcaaccattttgctcgctctgcttcagagtttgagagttctgagggtgtttcgctc
tttcctgagcttcgcataatcagcaccattacacgggaggtggagccagagggagatgga
gatgaagatcctacagtacaagagtctttggtatctgaagagatcatgcataacctggat
acgtgtgaggtgacagtgctaggagaggaactaaatcaggaacaagaaagcctggagatc
gacatgacacggttacagcagaaaggcattgagatgagtagttccaacctgggcatgata
atcacaggggttgatactatggctagttacgaagaagttttgcatttgatacactacaga
aactggcacaccgtttctctctttgacagaaagttcaaattagtctgttctgagcttaat
ggacgctacgtcagcaatgagtttaaagtggaggtgaatgttatccacacagctaaccca
gttgaacacgctaatcacatagctgcacaaccgcagtttgttcatccagtgcatcatacg
tttgttgatctctctggtcacaacttagctaaccctcatccattttcagttgttcccagc
acagccacggttgtgattgtagtttgcgtcagtttcctggtttttatgattattctggga
gtgttccgaatccgagctgcacatcagagaacgatgcgtgaccaggacactggaaaagaa
aatgagatggactgggatgactctgctttgaccatcactgtgaaccccatggagacttat
gaggatcaacacagcagcgaagaggaagaggaggaagaggaagaagaaagtgaagatgga
gaggaagatgacatcaccagtgccgagtctgaaagcagtgaggaggaagagggagagcag
gaggaggaccaacagaatgtcaatagacagcaacagctggaatgggatgactctaccctc
agttattga
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