Mycteria americana (wood stork): 142419107
Help
Entry
142419107 CDS
T11228
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
mame Mycteria americana (wood stork)
Pathway
mame04010
MAPK signaling pathway
mame04020
Calcium signaling pathway
mame04260
Cardiac muscle contraction
mame04261
Adrenergic signaling in cardiomyocytes
mame04270
Vascular smooth muscle contraction
mame04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142419107 (CACNA1S)
04020 Calcium signaling pathway
142419107 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
142419107 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
142419107 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
142419107 (CACNA1S)
04270 Vascular smooth muscle contraction
142419107 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mame04040
]
142419107 (CACNA1S)
Ion channels [BR:
mame04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
142419107 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
DUF2919
PRIMA1
Motif
Other DBs
NCBI-GeneID:
142419107
NCBI-ProteinID:
XP_075377858
LinkDB
All DBs
Position
20:complement(7764747..7814841)
Genome browser
AA seq
1850 aa
AA seq
DB search
MEPASPQDDVKKRQQKEKSKKPVPPPAPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNVANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVSLGLITMTLEQVNAKQGGTSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYLGTDVIATVASE
KPAPCTSSGHGRHCTINGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPSDEGGSETESLYEIEGMNKWILYFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILLVALNTLSIASEHHFQPEWLTQVQDNASWVLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGILETILVELGTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMEVRRSTFDN
FPQALISVFQILTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKSEDEKQMLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRMLCHRIVNATWFTNFILLFILLSSISLAAEDPIRAVSFRNQILGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIESSAISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTD
PSKMTEKECRGYFINYVDGDPTQIELQERVWLHSSFHFDNVFSAMMSLFTVSTFEGWPEL
LYMAIDTNAEDTGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSAEMNHISDILNVAFTILFTLEMVLKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTVLASSGGLYCLGGGCDSIDSDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGKLCDPESDFAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRTGGLFGQVDNFLEPSSPLQ
PHVASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNVNNANSNDWLEGMEYEDEVLRKMVP
AAPRHPARERNHPLPMERLQRRPSRRRGATSGGHPSSGLHLLPQELPREDGIVMGTASSS
GYQWGESRDPSTSSTPAITFLIQEALISGGLAALARDPSFVAVTRDEMAASSQLEMDEVE
KAAVELLKGRETLQGTKTGSASQDTLTASPASSPGLSTAPSQKTITATWL
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcttctccccaggatgacgtgaagaagaggcaacagaaggagaagtccaag
aagccggtgccaccaccagccccccggccagccagggctctgttctgcttaaccctgcaa
aacccgctgcggaaggcatgcatcagcattgtggagtggaaaccctttgagatcatcatc
ctcctgaccatctttgccaactgtgttgcactggccatctacctgccgatgcctgaggat
gacaccaatgttgccaactccagcctggagaagatcgaatacgccttcctgatcttcttt
gccattgaggcgatgctcaagataattgcctacgggtttcttttccatacggatgcctat
ctccgaaacggctggaacgtgctcgacttctccatcgtgtccctagggcttatcaccatg
accctggagcaggtcaatgcaaagcagggagggacttcagggggaaaaggcggcttcgac
gtgaaggccctgcgagcgtttcgtgtgctgagaccactgcgtctggtgtccggagtgccg
agccttcaggtcgtcctgaactccatcatcaaggccatggtgcccctgctccacatcgcc
ctgctggtcctcttcatgatcatcatctatgccattgtcgggcaagagctcttcaagggc
aagatgcacaagacctgctactatcttgggacagatgtgattgctacagtggcatcagag
aagccagccccatgcaccagctctggccacgggcgacactgcaccatcaatggcactgag
tgccgaagtggctggccagggcccaacaacggcatcactcactttgataactttggcttt
gctatgctgactgtctatcagtgcatcaccatggagggctggaccgaagtcctctactgg
gtaaatgatgccattgggaatgaatggccctggatctacttcgtcagccttatcttgctt
ggctctttctttgttctcaacctggtgctgggggtgctcagcggtgagttcaccaaagaa
cgtgagaaggccaagtcacggggcacatttcagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacccacgcggaggtcatggacagtgaccgg
gccaggggagaaggtatgatgccatcagatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaagtggattctctacttccgtcagtggaggcgttggaaccga
atgtttcgtaggaagtgcagggatgtggtgaagtccaagttcttctactggcttgtcatc
ctgctggtggcactgaacaccctctccatcgcctctgagcaccacttccagccagaatgg
ctgacacaggtgcaagacaacgccagctgggtgctgctagcactctttgtggctgagatg
ctgctgaagatgtatgcgctgggcctgcgccagtacttcatgtcgctcttcaaccgcttc
gactgcttcgtggtgtgtgcggggatcttggagaccatcctggtggaacttggcaccttg
tcacccctgggcatctctgtgctgcgttgcatccggctcctccgcatcttcaagatcacc
aggtactggacatccctgagcaacctggtggcctccctgctcaactcggtccgctccatt
gcctctctgctcctcctcctcttcctcttcatcattgtctttgcactgctgggcatgcag
ctctttgggggcaagtttgacttcgaggacatggaagtgcggcgcagcacatttgacaac
ttcccccaggccctcatcagtgtcttccagatcctgactggagaggactggaattcaatc
atgtacaatgggatcatggcctatgggggcccgtcctttcctggcatgctggtctgcatc
tacttcatcatcctcttcgtttgtgggaactatatcctcctcaatgtcttcctggccatt
gcagttgataacctggctgaggctgagagcctgaccttagcccagaaggccaaagcagag
gaacgcaagcggcggaagatgtccagaggttacccagagaagtctgaagatgagaagcag
atgctggcaaagaagcttgagcagaaagcgaagggagaagggattcctacaacagccaag
ttaaaagtggacgaatttgaatccaatgtcaatgagatcaaagacccctacccttctgca
gacttcccaggtgacgatgaggaagatgagcctgaaatccccctgagtcctcggccacgt
cctctcgcagagctacagctgaaagagaaggctgtgcccatgcctgaagccagctccttc
ttcatcttcagcccaaccaacaagtttcggatgctgtgccacagaattgtcaatgccacc
tggttcaccaacttcatcctgctcttcattctgctcagcagcatctcactggcagctgag
gatcccatccgggctgtgtctttccgcaaccagattctcggatactttgacattggtttc
acctctgtcttcacagtcgaaatcgtcctgaagatgacagcctacggtgctttcctgcac
aaaggctccttctgcaggaactctttcaacatactcgacttgctggtggttgctgtctcc
ctcatctccatgggaatcgagtccagtgccatctcagtggtgaagatcctccgggtgctg
agggtgctgaggcctctgcgagccattaacagggcaaaggggctgaagcatgtggtccag
tgcgtgttcgtggccatcaagactatcggtaacattgtggtcgtcacgacattgctgcag
ttcatgtttgcctgcattggggtccagctcttcaagggcaagttctatagatgcacagat
ccatccaagatgacggagaaggagtgcaggggttatttcatcaactatgtggacggggac
cccacacagattgagctacaggagcgtgtctggttgcacagcagcttccacttcgacaat
gtcttctcagccatgatgtcacttttcactgtctccaccttcgagggctggccagagctg
ctatacatggcaattgacactaatgctgaggatacaggccctatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaatatc
tttgtgggctttgtcattgtgaccttccaggagcagggggagagcgagtacaagaactgt
gagctggacaagaaccagcgccagtgtgtgcagtatgcactgaaggctcgcccgctgcgg
cgctacatccccaagaacccctaccagtaccagatctggtatgtggtcacctcctcctac
tttgagtacctcatgttcttcctgatcctgctgaacaccatctgcttgggcatgcagcat
tacaaccagtctgcagaaatgaaccacatctcagacatcctcaacgtggccttcaccatc
ctcttcaccctggagatggtcctcaagctcatggcctttaaagccaagggctacttcggg
gacccctggaacgtcttcgacttcctcatagtgattggcagcatcattgatgtcatcctc
agtgagattgacactgttcttgcatccagtggcggattgtactgcctcggcggaggctgt
gatagcattgactccgatgacaactcccgcgtctccataactttcttccgactgttccga
gtgatgcggttagtgaagctgttgagccggggggaaggtgtcaggaccctcctgtggacc
ttcatcaagtccttccaggctcttccctacgtagccctgctgattgtgatgctttttttc
atctatgctgtgatcgggatgcagatgtttgggaaaatcgccatggtggacgggacccag
atcaaccgaaacaacaacttccaaacctttccacaagctgtgctgctgctcttcaggtgt
gcaaccggcgaggcctggcaggagatcctgctggactgcagctacggcaagctgtgcgac
cctgagtcagactttgccgaaggcgaggagtacacctgtggcacgggcttcgcctacttc
tatttcatcagcttttacatgctctgtgccttcctgatcattaacctttttgtggccgtc
atcatggacaactttgactacctcacacgcgactggtccatccttggtccccatcacctg
gatgagttcaaacggatctgggctgaatatgaccccgaggccaagggcaggattaaacac
ttggatgtagtgactctgctgagacgtatccagcctcccttgggcttcgggaagttctgc
ccacaccgtgtagcttgtaagcgtctagtctgcatgaacatgcccctgaacagcgatggc
accgtcaccttcaatgcaaccctctttgcgctggtgaggacagccctcaagatcaagaca
gaaggtaactttgagcaagccaacgaggagctcagagccattataaaaaaaatctggaag
cgaacgagtatgaagcttttggaccaggtcatcccacctattggagatgatgaggtgact
gtgggcaaattctatgctactttcctcatccaagagcatttcaggaagttcatgaagcgc
caggaggagtattacgggtaccggcccaagaagaatcctgtggagatccaggctgggctg
aggagcattgaagaagaagctgctcctgaaatccatcgggccatctctggggacctgact
gctgaggaggagctggaaagagcaatggtggaggctgccatggaggaagggatatacagg
aggacaggtggcttgtttggccaggtcgataacttcctggagcccagcagccccctgcag
ccccacgtggccagccagaggcccctgcagttcacagaggtgggcagcgaggacctcgac
tcccccgtcttccttgatgacttcccccaggaaggcaacaccaacgtcaacaatgccaac
agcaatgactggctggaggggatggagtacgaggacgaggtgctgaggaagatggtgcca
gcagcacccaggcatccagcgcgggagcgcaaccaccccttacccatggagaggctgcaa
cggaggccgagcaggaggcgaggggccacctctgggggtcacccatcatcagggctgcac
cttctcccccaggagctgcctcgagaggatggcattgtgatgggaacggcatccagctca
gggtaccagtggggtgaaagcagagacccaagcacatcctccaccccggccatcaccttt
ctcattcaggaggctctgatctccgggggccttgcggctctggcccgtgacccatccttt
gtagcagtgaccagggacgagatggcggccagcagccaactggagatggatgaagtggag
aaagcagctgtggagctgctaaagggaagagaaacactgcagggcacaaaaactggctct
gcctcccaggacaccttgacggcatcaccagccagctccccagggctcagcacagcccct
tcccaaaagaccatcactgccacttggctgtga
DBGET
integrated database retrieval system
