Mycteria americana (wood stork): 142419374
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Entry
142419374 CDS
T11228
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03082
ATP-dependent chromatin remodeling
mame03083
Polycomb repressive complex
mame04110
Cell cycle
mame04330
Notch signaling pathway
mame04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142419374 (HDAC1)
03083 Polycomb repressive complex
142419374 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
142419374 (HDAC1)
04350 TGF-beta signaling pathway
142419374 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142419374 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mame03036
]
142419374 (HDAC1)
Enzymes [BR:
mame01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
142419374 (HDAC1)
Chromosome and associated proteins [BR:
mame03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
142419374 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
142419374 (HDAC1)
BRAF-HDAC complex
142419374 (HDAC1)
REST complex
142419374 (HDAC1)
SHIP complex
142419374 (HDAC1)
MiDAC complex
142419374 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
142419374 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
142419374 (HDAC1)
Chromatin remodeling factors
NuRD complex
142419374 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
142419374
NCBI-ProteinID:
XP_075378409
LinkDB
All DBs
Position
21:complement(2908333..2924580)
Genome browser
AA seq
480 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEF
SDSEDEGEGGRKNVANFKKAKRVKTEEEKEEEEKKDEKEEEKAKEEKAEPKGVKEETKST
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcaggggaccaagcggaaagtctgctactactacgatggtgatgttgga
aactactattatggccaaggacatcctatgaaaccccacaggatccggatgacccacaac
ctactgctgaactatggcctttacaggaagatggagatatatcgccctcacaaagcaaat
gcagaagaaatgaccaagtaccacagcgacgactacataaaatttctgagatctattcgc
ccagataacatgtctgagtacagcaagcagatgcaaagatttaatgttggggaagactgc
cctgtgtttgatgggttgtttgagttttgtcagctctctgctggaggctcagttgccagt
gctgtgaagctgaacaagcaacagacagatattgctgtgaattgggcaggaggccttcac
cacgctaagaagtcagaggcttctggcttctgttacgtcaacgatatcgtcttggctatc
ttggagctcctaaagtatcaccagagagtgctgtatattgacattgatattcaccacgga
gatggcgtggaggaagccttttataccacagaccgtgtcatgaccgtgtcctttcataag
tatggagaatacttcccaggaacaggggacctccgggatattggtgcaggcaaaggcaag
tactacgctgtcaactatcccctccgggatggaattgatgatgagtcctatgaagcaata
ttcaagccggtgatatctaaagtgatggagacgttccagcctagcgcagttgtcttgcag
tgcgggtcggattctctgtcaggggacaggctgggttgttttaatctgaccatcaaaggt
catgccaagtgtgtggagtttgtaaaaagttttaatttgcctatgctgatgctgggagga
ggtggctatacgatccgcaacgtggctagatgctggacctatgagactgctgtagctttg
gacactgaaattcccaatgaacttccgtataatgactattttgagtactttggaccagac
tttaagctccacatcagtccctcgaacatgactaaccagaataccaatgagtacctcgag
aagatcaagcaacgtctctttgagaatctgcgcatgctgcctcatgcccctggcgtccag
atgcagccaattcctgaggatgctgttcaggaagacagtggagatgaagaggaagaagat
cctgagaaacgcatttcaatccgcaattctgataagagaatatcctgtgatgaagaattc
tctgactctgaagatgaaggggaaggggggcgcaaaaatgttgccaactttaagaaagct
aagcgtgtgaaaacagaagaggaaaaggaggaagaagagaagaaagatgagaaagaagag
gaaaaagcaaaagaggagaaagcagaacccaaaggggtgaaggaagagacgaaatccacc
taa
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