Mycteria americana (wood stork): 142419668
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Entry
142419668 CDS
T11228
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
mame Mycteria americana (wood stork)
Pathway
mame03013
Nucleocytoplasmic transport
mame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142419668 (UPF2)
03015 mRNA surveillance pathway
142419668 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142419668 (UPF2)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
142419668 (UPF2)
mRNA cycle factors
P-body specific factors
142419668 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
142419668
NCBI-ProteinID:
XP_075379026
LinkDB
All DBs
Position
1:complement(7239531..7308060)
Genome browser
AA seq
1301 aa
AA seq
DB search
MILTCLGNTMPAERKKPANMEEKESLLNNKEKEFSERRPVSTREKPKEDVKVGMKRETLK
VPEDKKKKLEEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEEKK
KQEEAAAQLKEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNT
AFVKKLKTITEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQR
YADFAPSLLQAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLK
NIINADRESHTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPF
QNLLKEYFTSLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLAN
SQSLADLLDENMPDLPQEKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLI
DLKAFVPAILFKDNEKCSQNKDSGKDESRDSKDAKDNKEAPGSEDLELELENLDINDDPL
ELDCGDEAEDLTKKLLDEQGKRKGADSTGAENSDGKHAERKQEDEEASTGSHLKLIVDAF
LQQLPNCVNRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHP
CMSDVAEDLCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKML
LSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENA
YYYCNPPPAEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDAEVKDYVIC
CMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISS
AKFLGELYNYRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQ
YFDRGSSKRKLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCN
SLEEAIRQVQDLEREFLIKLGIVNDKDSKDSITEGENLEEDEEEEEGGAETEEQSGNESE
VNEPEEEEGSDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDE
DFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPF
VMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEM
LQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgattttgacttgcctgggtaacacgatgccagctgagcgcaaaaagccagcaaatatg
gaagaaaaagaatctctgttaaataataaagaaaaagaatttagtgaaaggcgaccagtg
agcaccagggagaagccaaaagaagatgtcaaggttggcatgaagagagagactttaaag
gttcctgaagataaaaagaaaaaactggaagaggataaaagaaaaaaagaagacaaggag
cggaagaaaaaagaggaggataaagtaaaggcagaagaagagcaaaagaagaaagaagag
gaagaaaaaaagaaacttgaagaagaggagaaaaagaaacaagaggaggaagagaaaaag
aaacaagaagaagcagctgctcaactgaaagaaaaagaggaagcacatcagctccatcag
gaggcttgggagcgccatcaggcaagaaaagagcttcgcagcaaaaaccagaatgcacca
gacaatcgccctgaggaaaacttcttcagcagactggattccagtctgaagaagaacaca
gcttttgttaagaagctaaaaaccattacagagcaacaaagggactccttgtcccatgac
tttaatagcctgaatttaagcaaatacattgcagaagcagtagcttctattgtggaagcc
aaactaaaaatatcagacgtgaactgcgctgtgcacttgtgttccctctttcaccagcgc
tatgctgattttgctccttcgttacttcaggcttggaaaaaacattttgaagcaaggaaa
gaagagaagactcccaacattaccaagttaagaactgatttgcgtttcattgcagaattg
acaatagttgggattttcactgacaaggaaggtctatctttaatctatgagcagcttaaa
aatattattaatgctgatcgagaatcccacactcatgtttctgtggttatcagcttttgt
cggcactgtggagatgacattgctggtttggtaccaaggaaagtaaaaactgttgcagag
aagtttaacttgagctttcctcctagtgagataattagcccagagaaacaacaacccttc
cagaatttgttgaaggaatactttacgtctttgaccaaacacctgaaaagggaccacagg
gagctacaaaatattgaaagacaaaacaggcgtattcttcactccaaaggagagctgagt
gaagatcgacacaagcaatatgaagaatttgcaatgtcctatcagaagctgttggccaat
tctcaatctctagctgatcttttggatgaaaatatgcctgaccttccccaagagaaacca
acacctgaggaacatggacctggtattgacattttcacaccaggaaagcctggagaatat
gacctggaggggggtatctgggaagacgaagatgctagaaacttctatgagaatctcatt
gatttaaaggcttttgtgccagcaattttgtttaaagataatgaaaaatgttcccagaac
aaggactccggcaaagatgaatcaagagattcaaaagatgccaaagataataaggaagca
cctgggagtgaggatttggagttggagctggagaacctcgatattaatgatgatcctctg
gagttagactgtggagatgaggcagaagatcttacaaaaaagcttcttgatgagcaaggg
aagagaaagggagcagatagcaccggagctgaaaatagtgacggaaaacatgctgaaaga
aaacaagaggacgaagaagccagtactggatctcatttaaaacttatagtagatgctttt
cttcagcagcttccaaattgtgtcaacagagacctcatagacaaggcagcaatggatttt
tgcatgaatatgaatacaaaagccaacagaagaaaactagtacgagcacttttcatagtt
cctagacaaaggttggatttgctaccgttttatgcaaggctggttgccacattgcatccc
tgtatgtctgatgtagcagaggatctttgttccatgctgaaaggggatttcagatttcat
gtaagaaaaaaggaccagatcaacattgaaacaaagaataaaactgtgagatttattggt
gagcttaccaagtttaagatgttctccaaaaatgatactctccactgtttaaagatgctt
ctgtcagacttttctcaccaccatattgaaatggcatgtactctgctggaaacctgtgga
agattcctctttagatcaccagaatctcacttaagaaccagtgttcttttggaacaaatg
atgagaaaaaaacaagcaatgcatctagatgcacgctatgttacaatggtagaaaatgcc
tattactactgtaatcctcctccagctgaaaaaactgtgaagaaaaaacgtcctcctttg
caagaatatattcgtaagcttctttataaggatctctccaaggtcaccacagagaaggtc
ctgagacagatgcgcaagctgccttggcaggatgcagaagtaaaagactatgttatatgc
tgtatgatcaacatctggaatgtgaaatataatagtattcactgtgtagccaacctctta
gcagggttggttctttaccaggaagatgttggaatccatgttgtggatggagtactagag
gatattcgactaggaatggaggttaaccaaccaaagtttaaccagcgacggatcagcagt
gccaagtttttgggggaactttacaattaccgaatggtggaatcagctgtaatatttcga
actctgtattctttcacatccttcggtgtgaaccctgatggtagtcctagtccactggat
cctccagagcatctcttcagaatcagactagtctgtacaatcctcgatacctgtgggcag
tattttgacagaggatccagcaaacgaaaacttgattgcttccttgtatattttcagcgg
tatgtttggtggaaaaaaagtctggatgtttggacaaaagaccatccgtttcctatagac
atagactatatgatcagtgatacactggaattgctaagaccaaagataaagctctgcaat
tctctggaagaagctatcagacaggtgcaagacttggaacgagaattcttaataaaatta
ggaattgtgaatgacaaagattccaaagattccattacggaaggagagaatctggaagag
gacgaagaggaggaggaaggtggagcagaaacagaggaacaatctggaaatgaaagtgaa
gtaaatgagccagaagaagaggagggctctgacaatgaggaagaagaaggtgaagaagaa
gaggaagaaaacacagattatcttacagactccaataaggaaaacgaaaccgatgaggag
aatacagaagtaatgattaaaggaggaggacttaagcatgtcccttgtgcagaagatgag
gacttcattcaggcattggataaaatgatgctggaaaatcttcagcaacggagtggcgaa
tctgttaaagtgcatcagttagatgttgctattcctctacatctcaaaagtcagctcaag
aagggtcccccacttggaggtggggaaggagagtcagagtctggagacacaatgccattt
gtcatgttaacacgaaaaggcaacaagcagcagtttaagatcctaaatgtaccaatgtct
tcccaacttgctgcaaaccattggaaccaacagcaagctgaacaggaggagagaatgagg
atgaaaaagctcaccttggatatcaatgaacggcaagaacaagaggactaccaggaaatg
ttgcagtctctggcacagcgtccagctccagcaaatactaatcgtgaacggcggcctcgt
taccagcatccgaagggagcacctaatgcagatctaatctttaaaaccggtgggaggaga
cgttga
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