Mycteria americana (wood stork): 142419896
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Entry
142419896 CDS
T11228
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
mame Mycteria americana (wood stork)
Pathway
mame03013
Nucleocytoplasmic transport
mame03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142419896 (CASC3)
03015 mRNA surveillance pathway
142419896 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142419896 (CASC3)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142419896 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
142419896
NCBI-ProteinID:
XP_075379419
LinkDB
All DBs
Position
22:complement(1377031..1389310)
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AA seq
720 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAARSRSGSGSGSGSGSPRPPHRPPRGAAGA
LSAGPRGRGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESA
KVELKQDSNDSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADSTT
PPRTFTNRSSAGTGRMPPPRNYPRMGGYKETRPSYRASEASVQHLSRNGEQTKQESNYRA
KRAEQTPPRDKSPEMEAAHVHSSPVKEEVALENQATAADAAQPPPDRPIEKKSYSRARRT
RIKAGDAGKLADEVPASEGLTPVPPKPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQI
NLTEQNWTPGQSQFIQTRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRP
PVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQ
TPAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPH
LYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDNKGEKSKERSNT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcgccgactcggcagccagcgccgcccgctcccgctcgggatccggctcc
ggctcgggctccggttccccccgcccgccgcaccgcccgccgcggggcgccgccggggcc
ctcagcgctgggccgcggggccgcggggccgagagcgctgccgggggcgcggccaagagc
gcgcccgagtccgagtgtgaaagcgaggatggcattgaaggagacgctgtactctcagat
tacgaaagcgcagaagactcggaggcagaggaagaggattacagcgaggaagaaagtgcc
aaagtggaactgaagcaggatagtaatgactcctgtgagtcagcggcaaaagcagagaaa
ggggatgagaaacctgactccaaaggtgctgtaactggtgagaggcaaagcggggacggg
caggagagcactgaacctgttgagaataaagttgggaaaaaagttcccaagcacctggac
gatgatgaggatcggaagaacccggcttacatcccacgcaaagggcttttctttgagcac
gacctccgagggcagacgcaggaggaggaggtcaggccgaagggtcgtcagcggaagctg
tggaaggacgagggccgttgggagcacgacaaattccgggaggacgagcaggcccccaag
accaggcaggagctgatcgcgctttatggctatgacatcaggtcagctcacaaccccgat
gacatcaagccgaggaggatgcgcaaaccaaggtttgggagtcctcctcagcgagaccca
aactggtccaacgagaggccaaataagcctccaaggcaccaaggtgcagacagcacaact
cccccgcgaacgttcaccaaccggagctctgcaggtacagggaggatgcccccgcctagg
aactacccgaggatggggggctacaaagagacccgtccaagctaccgagcttcggaagca
agcgtccagcatctgtctcgtaacggtgagcaaacgaaacaggagagcaactatcgagca
aagcgtgcagagcaaaccccaccgagagacaagtcacccgagatggaagcggcacatgtc
cacagcagccctgtgaaggaggaggttgctttggaaaaccaagccacggctgctgatgct
gcgcagccaccgccagacagaccaattgaaaagaagtcttattcccgggcaagaaggacc
agaatcaaagctggggatgcagggaagctggcagatgaagtgcccgcttcagaagggctg
actcctgtgcctccaaaacctgtgcaagccgagacgtcccccccgccagccaagagcagt
aactgggagtcgccggtagaatccagcttggatggactcgagcaagagatgacccaaata
aatctcactgagcagaactggactccggggcagtctcagttcatacagacccgggagctg
aggggtattcctaaccatatgcacgtgggaactgggccaccacctcagtttaacaggatg
gaggaaatggcggtgcaggggggccgtgtgaaacgctactcgtcgcagcggcagagaccg
ccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcactactacgac
ccactacaattccagggaccaatctacacccacagtgagaacccggccccgctgccgcct
caggggatgatcgtacagccagaaatgcacctccctcacccaggtttacatccccaccag
acgccagcccccatggcaaaccctgggctgtaccctccgccagtctccatgcccccgggc
cagcccccgccgcagcagctgcttgcaccgacttacttctcccctcctggagtcatgaat
tttgggaatcctggctacccctaccccccaggagcactaccccctccgccccctcctcat
ctctattccaacacgcaggcccagtcccaggtgtacggaggggtcacgtactacaacact
gtccagcagcaagtgcagcccaagccttctccacctcggaggacgtcccagcctgtgact
atcaagccaccgcctcccgaggacaacaaaggtgaaaaatcaaaggagaggagcaacacg
tag
DBGET
integrated database retrieval system
