Mycteria americana (wood stork): 142420201
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Entry
142420201 CDS
T11228
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142420201 (TIA1)
03041 Spliceosome [BR:
mame03041
]
142420201 (TIA1)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
142420201 (TIA1)
Spliceosome [BR:
mame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
142420201 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
RRM_3
Nup35_RRM_2
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
142420201
NCBI-ProteinID:
XP_075379955
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Position
23:complement(3004889..3019425)
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AA seq
383 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMISPVQQNQIG
YPPAYGQWGQWYGNAQIGQYVPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWMGANYGVQP
PQGQNGSVITNQTGYRVAGFETP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctatatgtggggaacctgtcaagagatgtgaccgaa
gctctaatcctccagctgttcagccagatcggaccatgcaaaaactgcaaaatgataatg
gatacagctggaaatgatccgtactgttttgtggagttctatgagcaccggcacgcggct
gcagcactggctgctatgaatggccggaagataatgggtaaggaggtcaaagtgaactgg
gcgacgacccccagcagccagaagaaagataccagcagtagtaccgttgtcaacacacag
cgttcacaagaccatttccatgtctttgtcggagacctcagtccagaaattacaactgaa
gatataaaagcagcttttgcgccgtttggaagaatatcagacgcacgtgtggttaaggac
atggcgacgggaaaatctaaaggatacggcttcgtttccttcttcaataaatgggatgca
gagaatgctattcagcagatgggcggtcagtggctcggtggaaggcaaatcagaacgaac
tgggcgacgagaaaacctccggctccaaagagtacatacgaatcgaacgccaaacaactc
tcttacgacgatgtggtcaatcagtccagcccgagcaactgcactgtgtactgcggaggt
gttacttcgggactgacagaacagctaatgcgccagaccttttctcccttcgggcagata
atggaaattcgagtcttcccagataaaggctactcctttgtacggtttaattctcacgag
agtgccgcgcatgcgatcgtttccgtcaacggaacaactatagaaggacacgtggtgaag
tgctactggggcaaggagacgccggacatgatcagtccggtccagcagaaccagatcggc
tacccgccggcgtacgggcagtggggccagtggtacggcaacgcccagatcggtcagtac
gtccccaacggctggcaggtccccgcctacgggatgtacgggcaagcgtggaatcagcag
ggctttaatcagacgcagtcttcggcggcgtggatgggcgccaactacggcgtgcagccg
ccgcaggggcagaacgggagcgtgataaccaaccagacgggataccgcgtggcgggcttc
gagacgccctga
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