Mycteria americana (wood stork): 142420309
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Entry
142420309 CDS
T11228
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
mame Mycteria americana (wood stork)
Pathway
mame04145
Phagosome
mame04510
Focal adhesion
mame04512
ECM-receptor interaction
mame04518
Integrin signaling
mame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142420309 (COMP)
04518 Integrin signaling
142420309 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
142420309 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
142420309 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142420309 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mame04131
]
142420309 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mame04147
]
142420309 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
mame00536
]
142420309 (COMP)
Membrane trafficking [BR:
mame04131
]
Endocytosis
Phagocytosis
Opsonins
142420309 (COMP)
Exosome [BR:
mame04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142420309 (COMP)
Exosomal proteins of colorectal cancer cells
142420309 (COMP)
Exosomal proteins of bladder cancer cells
142420309 (COMP)
Glycosaminoglycan binding proteins [BR:
mame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142420309 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
142420309
NCBI-ProteinID:
XP_075380200
LinkDB
All DBs
Position
24:complement(4852647..4890776)
Genome browser
AA seq
761 aa
AA seq
DB search
MISALAFVFLLCLSCRFSSCQQRRAGGEVGPEMLEEMRETNRVLMEVRDLLKQQIKEITF
LKNTVMECDACGMHTEATGPLITVTQFNRCLPNSCFPGVACTETGTGFRCGPCPPGYSGN
GSQCTDINECNANPCFPKVQCINTVPGFRCDPCPPGFTGQMVEGVGLAYARANKQVCTDI
NECETGAARNCVPNSICINTRGSYKCGACKPGFVGDQVTGCKSQTVRRCPNGEISPCHEK
AQCIVERDGSISCVCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCVTVPNSGQ
EDADRDGIGDACDDDADGDGILNAEDNCMYTRNADQRNADKDNFGDACDNCRQVKNNDQR
DIDGDGRGDECDDDMDGDGIKNTVDNCVRVPNADQKDGDGDGVGDVCDSCPTVSNPDQKD
TDHDLVGDVCDTNQDSDGDGHQDTRDNCPSVPNSSQVDTDNDGLGDECDDDDDNDGIPDE
KPPGPDNCRLVPNPGQEDSDGDGVGNVCEDDFDKDMVIDRIDVCPENAEVTLTDFRAFQT
VVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDY
AGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWH
TGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVLDTT
MRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRVQQD
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagctctagcctttgtttttctcctctgcctctcttgtcgtttttcatcatgt
cagcagagaagagcaggaggtgaagttgggccagaaatgctggaagagatgagagaaact
aaccgtgtgctaatggaagttcgagacttgttgaaacagcagattaaggagataacattc
ctgaagaatacagtcatggagtgtgatgcctgtggcatgcacaccgaggcgacaggccct
ctcatcaccgtgacacaatttaacagatgcctcccaaactcctgcttccctggagtggcc
tgcactgagaccggcactggcttccgctgtggaccctgtcccccaggttattcaggcaat
gggtcacagtgcacagatatcaatgagtgcaatgcaaacccctgcttcccgaaggtccag
tgcattaacactgtccctggcttccgctgtgatccctgccctcccggcttcactgggcaa
atggttgaaggagttggactagcttatgccagggccaacaaacaggtttgtaccgacatc
aatgaatgtgagacaggtgctgccagaaattgcgttccaaactccatctgcatcaataca
cggggatcctacaagtgcggggcttgtaaacctggctttgttggggatcaagtcactggc
tgcaagagccagacagtgagacgctgtcctaatggtgaaattagtccatgtcacgagaaa
gcacagtgcatcgtggagcgcgacgggtccatctcctgcgtgtgcctcgtggggtgggca
gggaacggctacgtctgtgggaaggatacggacattgatggagtccctgatgagaagcaa
cgctgctctgacaaaaaatgccgcaaggataactgcgtgactgtccccaactctggccaa
gaggatgcagacagggatggaattggagatgcttgtgacgatgatgctgacggagatggg
atattaaatgctgaggacaactgcatgtacacccgcaatgcagaccagcgcaatgcagac
aaggataactttggtgatgcctgtgacaactgtcgccaagtgaagaacaatgatcaacgg
gacattgatggcgatgggaggggagacgagtgtgacgatgacatggatggagatgggatc
aaaaacacagtggacaactgcgtaagagttcctaacgctgatcaaaaagatggtgatggt
gatggagtaggagatgtgtgtgacagctgcccaacagtcagtaacccagaccagaaagat
actgatcacgatctagtgggagacgtctgtgacaccaaccaggacagtgatggggatggc
caccaagatacacgggataactgcccatcagtgcccaacagctcccaggtggacacagac
aacgacgggctgggagatgaatgtgatgatgatgacgacaatgatgggattccagacgag
aaacctccaggtcccgacaactgtcggcttgtccctaaccctggccaagaagactcagac
ggtgatggtgtgggaaacgtttgtgaagatgactttgacaaagacatggtgattgacaga
attgatgtgtgcccagagaacgcagaagtgacactaacagacttcagggctttccagacg
gttgtattggaccctgagggtgatgcacagattgaccccaactggattgtcctcaaccag
ggcatggaaattgtccagaccatgaacagcgatcctggcctggctgtaggttacacggca
ttcaatggagtggactttgagggcacgttccatgtcaacactgccacagatgatgattat
gctggcttcatatttggctaccaggacagttccagcttttatgtggtcatgtggaagcag
atggaacagacatactggcaggcaaaccccttccgagcagtagcagaacctggaattcaa
ctgaaggcagtgaagtctaaaacaggcccaggtgagtatctccgcaattctctctggcac
accggagacaccacagatcaggtcaaactgctgtggaaagaccctcgcaattctggctgg
aaggacaagacatcttaccgctggttcctgcaacatcgtcctcaagtcggatacatcaga
gctcgcttctatgaaggccctgaagtagtagcagacactggagttgtccttgatacaact
atgcgaggaggccgcctgggagtcttctgcttctcccaagagaacattatttggtcaaac
ctgcgttaccgctgcaacgacaccattccagaagattatgaaacatttagagttcagcaa
gactaa
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