Mycteria americana (wood stork): 142421143
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Entry
142421143 CDS
T11228
Symbol
DDX23
Name
(RefSeq) putative ATP-dependent RNA helicase DDX23 isoform X1
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142421143 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mame03041
]
142421143 (DDX23)
Enzymes [BR:
mame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142421143 (DDX23)
Spliceosome [BR:
mame03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
142421143 (DDX23)
Complex C
U5 SnRNP specific factors
142421143 (DDX23)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DDX23
ResIII
Mycobacteriophage_73
CARDS_D3
Motif
Other DBs
NCBI-GeneID:
142421143
NCBI-ProteinID:
XP_075381770
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All DBs
Position
26:complement(2057922..2063266)
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AA seq
820 aa
AA seq
DB search
MAGELADKKDRDASPAKEERKRSRSPDRDRDRDRERERDRKGSPSKDRKRHRSRDRRRGS
RSRSRSRSKSPERDRRHKERDRDRGKKDREREKDGHRRDKDRKRSSLSPSRGKDSKSRKE
RDSRKAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQQE
VEERQRLLEEERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGTEDEEGRQKIREE
KDKSKELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIHDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSTVFYDLK
QAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggccggagaactggcagacaagaaggaccgggacgcatcccctgccaaggaggagagg
aaacgttcccgctccccagacagggaccgggatcgggaccgggagcgggagcgggaccgc
aagggttccccctccaaggacagaaagcggcaccggtcccgggacaggagacgaggcagc
cggtcgcggtcccgctcccggtccaagtcgccagagagggatcgccggcacaaagagcgt
gaccgggaccgaggcaagaaggaccgggagcgggagaaggatgggcaccggcgggacaag
gacaggaagcggtcgagcttgtccccgagcaggggcaaggactcaaagtcccggaaggag
cgagactcacggaaagcagaggaggaggaggagaatgccctgaagaaggagaaggcccag
cccctgtccttggaggagctgctggctaagaagaaggctgaagaggaggcggaagccaag
cccaagttcctgtccaaggcggagcgggaggccgaggccttgcggcggcggcagcaggag
gtggaggagcggcagcggctgctggaggaggagaggaagaagaggaagcagttccaggaa
atggggaggaagatgctggaagacccccaggagcgtgagcgcagggagcgccgcgagcgc
atggagcgggagaccaacggcacggaggacgaggagggcaggcagaagatccgggaggag
aaagacaagagcaaagagctccacgccatcaaggagcgttacctgggaggagtgaagaag
cggagacgcacgcggcacctgaacgaccgcaagtttgtcttcgagtgggacgcgtcggaa
gacacgtccattgattacaaccccctgtacaaggagcggcaccaagtgcagctgctgggc
cggggcttcatcgcaggcatcgacctgaagcagcagaaacgggaacagtcgcgcttctac
ggggacctgatggagaagaggcggacgctggaggagaaggagcaggaggaggcccggctg
cggaagctgcggaagaaggaggccaagcagcgctgggacgaccggcactggtcccagaag
aagctggacgagatgacggacagggactggcgcatcttccgcgaggactacagcatcacc
accaaggggggcaagatccccaaccccatccgctcctggaaggactcctccctgcccccc
cacatcctggaggtcatcgacaagtgcggctacaaggagcccacccccatccagcgccag
gccatccccatcggcctgcagaaccgcgacatcatcggcgtggccgagaccggcagcggc
aaaaccgcggctttcctcatcccgctgctggtgtggatcaccaccctgcccaagatcgat
cggattgaggagtcggaccagggtccctacgccatcatcctggcccccacccgagagctg
gcccagcagattgaggaggaaaccatcaagtttgggaagcctctgggcatccgcacggtg
gccgtgatcggaggcatctcccgcgaggaccaaggcttccgccttcgcatgggctgcgag
atcgtcatcgccacgccagggcgtctcatcgacgtgctggagaaccggtacctggtgttg
agccgctgcacctacgtggtgctggacgaggcggatcgcatgatcgacatgggcttcgag
cctgacgtacagaagatcctggagcacatgcccgtcaccaaccaaaaacccgacaccgac
gaggccgaggaccctgagaagatgttggccaactttgagtcggggaagcacaagtaccga
cagaccgtcatgttcacggccaccatgccgccagcggtggagcgcctggcccgcagctac
ctccgtcgtccggccgtggtctacatcggctccgccggcaaacctcacgagcgggtggag
cagaaggtcttcctcatgtcggagtcagagaagaggaagaagctgttagccatcctggag
cagggcttcgacccgcccatcatcatcttcgtcaaccagaagaagggctgcgacgtgctg
gcgaagtccctggagaagatggggtacaacgcctgcaccctgcacggcggcaaaggccag
gagcagcgggagtttgccctctccaacctgaaggccggggccaaggacatcctggtggcc
acggacgtggccggacgcggtatcgacatccacgacgtctccatggtcgtcaactacgac
atggccaagaacatcgaggattacatccaccgcatcggacggacgggccgagcggggaag
agcggcgtagccatcaccttcctcaccaaggaggactccaccgtcttctacgacctgaag
caggccatcctggagagcccggtgtcctcttgcccgcccgagctggccaaccaccccgac
gcccagcacaagcctggcaccatcctcaccaagaagcggcgggaggaaaccatctttgcc
tga
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