Mycteria americana (wood stork): 142421296
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Entry
142421296 CDS
T11228
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
mame Mycteria americana (wood stork)
Pathway
mame04382
Cornified envelope formation
mame04510
Focal adhesion
mame04512
ECM-receptor interaction
mame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142421296 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142421296 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142421296 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142421296 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mame04147
]
142421296 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
mame00536
]
142421296 (COL4A2)
Exosome [BR:
mame04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
142421296 (COL4A2)
Glycosaminoglycan binding proteins [BR:
mame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142421296 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
142421296
NCBI-ProteinID:
XP_075382011
LinkDB
All DBs
Position
1:complement(156954551..157100840)
Genome browser
AA seq
1715 aa
AA seq
DB search
MDISQLPGARIFVCQDLGLLLILMEVVLSAVKVDAGGKTYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGYTGPPGLTGIPGVQGPKGHKGERGYPGISGPKGEMGQRGVTGFPGADG
IPGHPGQPGSRGKPGHDGCNGTVGDPGDSGSPGLSGFPGTIGVQGPKGQKGEPYILPPDI
ASRYRGEPGDPGFNGFQGPPGVLGIQGPVGPRGERGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGPPGPPGPPGLPTRELMGVPSDKHKGERGEPGQKGEAGIAGVLLYAPEKGEEGVMG
FPGQRGLPGINGFPGLSGERGFPGFDGPPGGYGPRGSKGEPGEIGPPGPVSYFPSRFPRK
GARGDPGFPGASGLQGDPGEEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEFGSPAY
QAGPPGLPGKQGTPGLRGPPGPVGSPGSLFGLKGQEGTPGRFGMQGFPGPRGQKGPKGEE
GDCSKCLVGDEIRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGIPGFPGAKGFSGQAG
FPGPKGAKGDSLHITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDGIRGF
PGDPGYPGELGPKGFPGEAGLPGEGFPGPKGYRGSPGDHGQDGNPGPPGLPGLPGEPGQL
DCGQVIEDFSRGDGTEPIWSGAGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGYPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGVAGPKGFPGDVL
GAAAGSRGDVGLPGFPGLKGMPGDQGVPGVRGADGNPGLPGPKGDPGPQGLPGLMGLPGI
RGMHGFPGLPGNRGPDGGPGSQGPVGPPGPRGEDGEQGFPGPVGLKGLSGDKGETGYPGL
QGVPGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMPGLKGRPGIKGIKGELGPLGAQGD
RGSQGARGFKGDRGDQGPPGEPPKLKPGMMLEVKGEKGDVGERGTKGFLGLKGSKGMPGI
PGKTGTPGSPGHPSYVAGVKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGEKGTPG
ISGHFGTPGSHGEIGERGDIINLPGMPGLKGEIGVPGLTGTRGGSGQKGEGGDPGFRGIE
GPKGTQGVPGSVGQEGLPGLVGPPGQQGSPGTPGFQGEKGTSGWPGLPGQAGLPGLRGIS
GLHGLPGTKGIPGSPGPDGYGSAGFPGTVGDKGEAGEPSRVEGSRGPPGQKGDRGVPGVQ
GPFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGLQGQPGIPAPPGSKGESGQT
GVSGQIGPKGSRGDPGSPGRPGIPGYPGPKGRKGEQGVIGFVGTVGFPGGMGPIGPKGDR
GVTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGNIGPQGSPGDMGTQGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGATGFQGPVGFEGQPGRPGSPGLPGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICY
YANRNDKSYWLSTTAPLPMMPVAEEDIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcgcagcttcccggtgcacgtatttttgtttgtcaggatctggggcttctg
ctgatcctgatggaagtcgtgctgtccgccgtcaaagtggatgctggtggtaagacttac
acgggaccatgtggaggaagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacaggggtacactggaccaccaggattgacg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatatccaggaata
agtggacccaaaggagaaatggggcaaagaggagtcactggattccccggggcagatggc
attcctggtcatccagggcagccaggatcaagggggaaaccgggtcatgatggctgtaac
gggacagtaggtgaccctggtgattcgggaagtcccggactctctggtttccctggtacc
attggagtccaggggccaaagggccagaagggggagccctatatactgccgccggacatc
gcaagccgctacaggggggaacctggggatccagggttcaatggttttcaaggacctcca
ggtgtgctgggtattcaaggacctgttggtccaagaggagaacgaggaaggccaggacca
ccagggcccccaggaccaccaggaccacaaggcaacaggggccttggcttctatggagaa
aaaggtgaacagggccccccaggtcctccaggtccacctgggcttcctacaagagaactg
atgggtgtcccctctgacaaacacaagggtgaaagaggagaacctggacaaaaaggggaa
gctggaattgcaggtgtacttctctatgctcctgaaaaaggtgaagaaggggtaatgggc
ttcccaggacaaaggggactgcctggcatcaatggttttccaggactcagtggagaaaga
ggttttccaggatttgatggtccaccaggtggctatggtcctaggggaagcaagggggag
ccaggcgagatcggtcctccaggaccagtctcctattttccttcccgcttcccaaggaaa
ggtgcaagaggtgatccaggctttccaggtgcttctggactacagggagacccaggagag
gagggagatcgtgggctgcctggtcttcctgggttctctgatgcggatggagataagcca
ggcttacctggagaaatgggaccaaaaggcgaaaaaggtgaattcggatctcccgcttat
caggcgggcccgcctgggcttccgggtaagcaaggcacaccaggactccgtggtccacct
ggtcccgttggatcccccggttctctctttggattaaaaggacaggaggggacaccaggt
agatttggcatgcaaggtttccccgggccaagaggacaaaaaggacctaaaggcgaagaa
ggggactgcagtaaatgccttgtgggtgatgaaatcagaaggggctctactggcccccct
ggccctcctggctttccaggaaccccgggccagcctgggaggaaaggagagcctggtgat
caaggaccacatggtattcctggcttccctggagcaaaaggattttcaggtcaagctgga
tttcctggaccaaaaggagcaaagggagattctttacacataactactaaaggcaccaaa
ggaatccgaggagatcccgggctgcctggtatcagaggtgaagatggtttcccaggcaga
gatggattagatggtttaccaggacagcctggccttccgggtgatggtatcagaggtttc
cccggcgatcctggttatccaggtgaattaggcccaaagggctttccaggagaagcaggc
ctgccaggtgaaggatttcctggtccaaaagggtaccggggttctccaggtgaccatgga
caagatggaaatccaggacctccaggtctgcccggtctgccaggagagcctggccaacta
gactgtgggcaggtcatcgaagacttttctagaggagatggaaccgagccaatatggtca
ggcgcgggctgtgtgaggccaccaaagggatcccaaggcaagccaggactgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggttttact
gggcccaggggagacaggggcccgaacggtctacctggactgcagggacacccaggcctt
acaggaaaatctggtgctccgggagtggcaggaccgaagggctttcctggtgacgtttta
ggagcagcggcaggttcccgaggggatgtcgggctccccggcttcccagggttgaaaggc
atgccaggagatcaaggagtaccgggagttagaggtgcggatggtaacccaggtttgcca
ggacccaaaggagatccagggccgcaaggtctccctggtttgatgggattgccaggaata
cgaggaatgcatggattcccagggctaccaggaaaccgtgggccagatggcgggcctggc
tctcaaggacctgttggtccacctggtcctaggggagaagacggtgagcaaggttttcct
ggccccgtgggcctgaaaggtctgtctggtgacaaaggcgaaacaggttacccgggatta
caaggtgtacctggcgtgactggtccccctggcataagcggcatggatggctttccagga
gataaaggctcaagaggttcacctggcattgatggtttcaaaggcatgccaggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaattgggcccgttgggggctcagggcgat
agaggctcgcagggcgcacgcggctttaaaggtgaccgtggggatcaaggcccgccggga
gaacccccaaaactcaagcccggcatgatgctggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacaaagggattccttggcttaaaaggtagcaagggaatgccaggcatt
cccggaaagacaggaactccggggtcccctgggcatcccagctacgtggctggtgtgaaa
ggggacatcggcgcaaaagggctgacaggtctgaaaggctatcccggtccagccggctct
cctggcatcagaggcttccctggcagcacaggaggcaggggagaaaagggtactccagga
atttcaggccattttggtactcctggctcacatggtgaaataggtgagcggggagatatt
ataaacttaccaggaatgccaggccttaaaggggaaattggtgtgccaggcttaacaggc
acaagaggaggctcaggacaaaaaggcgaaggtggtgatcctggtttccgtggcattgaa
ggccccaagggcacacaaggtgtccctggctctgtgggacaggaaggtttgccaggactg
gtcggtcccccagggcagcaaggaagccccgggacgcctggatttcaaggtgaaaaggga
acttctggctggcctggcttaccaggacaagcaggcttgcctggcttaagaggaatcagt
ggactgcatggcttaccgggcactaagggcataccaggatcaccaggtccagatggctac
ggctctgcaggtttcccaggtacagtgggtgacaaaggggaagcgggagagccaagcaga
gtggaaggcagccgaggacctccgggtcagaagggagacagaggtgttccaggagtccaa
ggaccctttggcattcctgggcaggaaggatttccagggcctcctgggatttcaaatata
tcaggatatcctggtgataaaggctccccaggtctagacggagtgccaggctatccagga
ctacaggggcagcctggaataccggccccaccaggaagcaaaggagaaagtggacaaaca
ggtgtgagtggacaaattggcccaaaaggaagtagaggtgatcctggatcaccagggaga
cctggcattcctgggtaccctggaccaaaaggtcgtaaaggtgaacaaggtgtcatcggc
tttgtgggcacagtaggatttccaggtggtatgggacctatcggacccaagggggataga
ggagtaactggctttcagggccctccaggctctcctgggctgccccctcttcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatataggacctcaaggaagccca
ggagatatgggaactcagggtccaccaggcgatccaggtttcagaggctcacctggagag
ccaggactccagggcaggggtggcattccagctcctcctggctccagaggtgaacaagga
gcaacagggtttcagggtccggtgggatttgaaggtcagccaggccgtcccggtagcccc
ggactgccaggcatgccgggtcgcagcgttagcatgggctacctgctggtgaagcacagc
cagtccgatcaagagccaatgtgcccagttggcatgaacaaactctggagtggatacagc
ctactgtactttgaaggacaagagaaagcacacaaccaggatctagggctggctggctca
tgtttggctcggtttagtactatgccattcctctactgtaaccctggggatatttgttat
tatgcaaatcgaaatgataaatcctactggctctcaactacagcacctcttccaatgatg
cccgtggcagaagaagacatcaggccatatatcagtcgctgctcagtttgtgaggcccca
gctgtggcaattgctgtccatagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttgtggattggatattccttccttatgcacactgctgctggtgatgaaggtgga
ggacagtcgctggtttctcctgggagctgcctggaagatttcagagcgactcctttcatc
gaatgcaatggcgcacgcggaacctgtcactactttgcaaacaaatacagcttctggctc
actacgatcgaccagcccttccaaagcaagccctcggcagatacgctgaaggcaggactc
atccgaagccatatcagcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
