Mycteria americana (wood stork): 142421484
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Entry
142421484 CDS
T11228
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mame03041
]
142421484
Spliceosome [BR:
mame03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142421484
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_11
TPR_10
HH_EMRA
Motif
Other DBs
NCBI-GeneID:
142421484
NCBI-ProteinID:
XP_075382261
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All DBs
Position
30:117943..126595
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AA seq
710 aa
AA seq
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MAAEGPEAPASPSRGGAEGALGDGGDGGTGPPGEPEAPVAELPPPALSTTEEEHSDAAIV
PPIPQSCNGAAAPPEPEEPPPAAPEEPPPPRDPEPPVEEPTITYPLDFEKFWQAAHNNPH
DFTAWTELLQYVEQENHLFAARKAFDAFFAHYPYCYGYWKKYADMERRFDCSRETEEVFE
RGLQSIPLSMDLWIHYISYLQSTLDMNLPESIQKIRGVFEAAVAAAGMDFRSDKLWELYV
EWEREQGDLRAVTGIYDRVLSMPTQLYNHHWEKFKEHVLHNPPKDILSPEELLWVQSKLA
TDPVPKPPEPEGTEAPPGEDLPPGVEGKAAAAAADTQEDLDQEKIRELVISMRQQIYAQN
EAEVSKRWNFEDGIKRPYFHVKPLERAQLRNWRDYLDYEMAAGSHERTIVLFERCVIACA
LYEEFWIKYTKYLENHTVTGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGNLDEARRIL
RCFEEVVPGLAMVRLRRVSLERRQGNLEEAEALLLEAMHANEGLPLASFYAVKLARQACK
VQKNLGKARKVLVDALEKDPDNARLHANLLEMEFGADVRQNEGNTMSCFERALRSPLPDE
AKLIFSQRRVEFLEDFGSSIHSLLTAYDEHQKILKQHAARKRAPENGSDEPDDKRLRPDE
ATGLLGPLNFSGSGGDVGSNPSAYNYWYQHGYGAYSYQTPWNYNQYYSQS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagaggggccagaggctccggccagcccgagccgcggtggggccgagggcgcg
ctgggggacggcggagacggcggcactggaccccccggtgagccggaagctcctgtggca
gagctgccgcccccagccctcagcaccaccgaggaggagcacagcgatgctgccatcgtc
ccccctatcccacagagctgcaacggtgccgctgccccccctgagcccgaggagccgccc
ccggccgctcccgaggaacccccacccccccgggaccccgagccccccgtggaggagccc
accatcacctacccccttgatttcgagaagttttggcaggcggcgcacaacaaccctcac
gacttcactgcctggactgagctcctgcagtacgtcgagcaagagaaccacctcttcgcc
gcccgcaaagcctttgacgccttctttgcccactacccctactgctacggctactggaaa
aaatatgccgacatggagcgtcgctttgactgcagccgggagactgaggaggtgtttgag
cgggggctgcagtccatccccctcagcatggacctgtggatccactacatctcctacctc
cagtccaccctggacatgaatcttcccgaatctatccaaaaaatccgtggcgtcttcgag
gcagcagttgcggcggctggcatggatttccgctcagataagttgtgggagctctacgtg
gaatgggaacgggaacagggagacctgagagccgtcactggtatctatgaccgcgtcctc
tccatgcccacgcagctctacaaccaccactgggagaagttcaaggagcacgtcctccac
aatcccccaaaagacatcttgtccccggaggagcttctctgggtccaatccaagctggcc
accgatcctgtgccgaaaccgccggagccggaagggacggaagcgccaccgggagaggat
ctgccccccggtgtggaggggaaagcggcggcagcggcagctgacacccaggaggatcta
gaccaggagaagatccgggagctggtgatctccatgcggcaacaaatctacgctcaaaac
gaggctgaagtcagcaaacgatggaattttgaggatgggatcaagcgtccctatttccac
gtgaagccactggagagggctcagctgcggaattggcgggattatttggattacgaaatg
gcggctggctcgcacgaacgcaccatcgtcctctttgaacgctgcgtcatcgcctgcgcc
ctctacgaggagttttggatcaagtacaccaaatatttggaaaatcacacggtgacgggg
gccaggagcgtttttcagcgagcgtgtggttatcatctgcccaggaaacccaacatccat
ctcctctgggcagcttttgaggagaaacaagggaatctggatgaagcccggcgtatccta
cgctgctttgaggaggtggtgccgggtttggccatggtccggctgcgccgtgtcagcctg
gaacgacggcagggaaacctggaggaggcagaggcgctgctgctggaagccatgcacgct
aacgaggggctgcccctcgcctccttctatgctgtcaaattggctcggcaagcctgcaag
gtgcagaaaaaccttggcaaagctcggaaggtgctggtggacgccctggaaaaggatccg
gacaacgcccgcctccacgccaatctcctggagatggaattcggggccgatgtccgacaa
aacgaaggtaacaccatgagctgcttcgagcgggcgctgcgcagccccctccctgacgaa
gccaaactcatcttctcccaacgccgcgtcgagttcctcgaggatttcggctctagcata
cacagcctgctgacggcttacgacgagcaccagaagatcctcaaacagcacgcggcacgc
aagagggctcctgagaacggctcggatgaaccagatgacaaacgtctccgccccgatgaa
gccactggtcttttgggtcccctcaacttctccggctccgggggggatgtgggatccaac
ccctctgcctacaactactggtaccagcacggctacggcgcctacagctaccagacgcca
tggaactacaaccagtactactcgcagagctga
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