Mycteria americana (wood stork): 142421485
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Entry
142421485 CDS
T11228
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mame Mycteria americana (wood stork)
Pathway
mame04120
Ubiquitin mediated proteolysis
mame04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142421485 (SYVN1)
04120 Ubiquitin mediated proteolysis
142421485 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mame04121
]
142421485 (SYVN1)
Enzymes [BR:
mame01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142421485 (SYVN1)
Ubiquitin system [BR:
mame04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142421485 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
142421485
NCBI-ProteinID:
XP_075382263
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Position
30:107389..117212
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AA seq
608 aa
AA seq
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MLCTAVVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDSKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQPPPEPPEQAPPPPQTPQVP
QPPNFPQGILPPFPPGMFPFWPPVGPFPPVPGVQPPNSTENAAPSSGATSAARPGDTANA
GSESAATGAMPGLPFPPPWMGMPWPPLFGFPPMPMPPAGFAGLTEEELRAMEGHDRQNLE
ARLQCLQNIHTLLDAAMVQINQYLTVLATIGSPRPATPRPPSTREAPAEEPTPLRSPSSP
SAPATTATAGSAAAADPTTPVGAEGFTAKEEEEEEDSGEGPSLLDEPDTAELRRRRLQKL
ASPPAASH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcacggcggtggtgatggcggggagcctggcgctgacgacagcggtggtggct
catgcctattacctgaagcaccagttctatcccaccgtggtttatcttaccaaatccagc
cccagcatggctgttctctacatccaggccttcgtgttggtttttctccttggtaaattt
atgggcaaggtgttttttgggcagctgcgggcagcggagatggagcacctactcgagcgg
tcgtggtacgccgtgacagagacctgcctggccttcactgtcttcagggatgacttcagc
cctcgctttgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggttggct
gaagaccgggtggactttatggaaaggagccccaacatctcctggctcttccacttccgt
atcgtctccctgatgttcctcctgggaatcctggatttcctgtttgttaaccacgcgtac
cacagcatactcacgcgaggcgcttctgtccagctcgtctttggctttgagtatgccatc
ctcatgaccatggtgctcaccatcttcatcaagtacgtcctacattccattgacctgcag
aatgagaacccttgggacagtaaagccgtctacatgctgtacacggagctcttcacaggc
ttcatcaaagtcctcctctacatggccttcatgaccatcatgatcaaagtccacaccttc
ccactctttgccatccgccccatgtacctggcaatgaggcagtttaagaaagcagtgacg
gatgccatcatgtcccgccgggccatccgcaacatgaatacactctaccctgatgccacg
ccggaagagctgcaggccatggacaatgtctgcatcatctgccgcgaggagatggtgacg
ggtgccaagcgtttgccttgcaaccacatcttccacaccagctgcctgcggtcgtggttc
cagcgccagcagacatgtcccacctgccgcatggacgttctccgggcttccctcccggca
cagccacctcctgagccaccagagcaagccccgccaccgccccagaccccccaagttccc
cagccccccaactttcctcagggaatccttccccccttccccccgggaatgtttcccttc
tggccgccagttggtcccttcccaccagttcccggcgttcaaccaccaaacagcaccgaa
aatgccgcgccaagctctggtgccacatcagctgcgaggcctggtgacaccgccaatgct
ggatcggaatctgcggcaacaggggcgatgccgggtcttcctttcccaccgccgtggatg
ggaatgccgtggccgcccctctttggcttcccgccgatgccgatgccgccagctggcttt
gctggcttaacagaggaagaacttcgagccatggagggccatgatcggcaaaacctggaa
gcgcggttacagtgtctacagaacatccacacccttcttgatgccgccatggtgcagatc
aaccaatacctgacagtcctggccaccatcgggtcgccccggcccgccactccccggccc
ccctccacccgtgaggcccctgccgaggaacccacccccctccgctcgcccagcagccct
tcggcacccgcaaccaccgccactgccggctctgcagctgccgccgatcccaccacgccg
gtgggtgccgaaggcttcaccgccaaggaggaagaggaggaagaggacagcggtgaaggc
ccgtccttgctggatgaacccgacacagcggagctccgccgccgccggctacagaaactg
gcatcgccaccggcagcctcacactga
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