Mycteria americana (wood stork): 142421561
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Entry
142421561 CDS
T11228
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mame Mycteria americana (wood stork)
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mame04131
]
142421561 (VPS13A)
Membrane trafficking [BR:
mame04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
142421561 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
DUF5764
Motif
Other DBs
NCBI-GeneID:
142421561
NCBI-ProteinID:
XP_075382427
LinkDB
All DBs
Position
Z:34285731..34399701
Genome browser
AA seq
3195 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEARQLLEARQRELQRIEE
AKQKIADQDKVKEEKQDTFVEKLVTQVIKNLQVKISNIHIRYEDDITNRNNPLSFGISLQ
NLSLQTSDKNWNPCLHDETAKLFYKLVRLDNLFAYWNVKSEMFYHGGCDESLVNLKQGVA
SHNVIPEGYDFVFRPISARAKLLMNPRSDVDFSSPKMDLDVNLQDITVEFNKPQYFSVME
LLESIDMMTRNLPYRKYRPDVPLHNNAKTWWKYVIYGILEVNVQPKLQMWSWEHIRHHRR
QVKSYKEMYKTKITSKKPNEEILKLLEEFEKALDIFNITLARQQAEVEATKAGLKIYRPG
VKQDDENSGGWFSWIWSWSGEKKDEQKQEVKGSSLEELMTREEKAKLYAAIGYSETAVDP
TLPKSYEAMKFSVKLLSMSISIRENKQSPELVEFALAGLSTVFTQRPGAQAIRFETKITS
LEVTGMSREKCTPCLLSSRTVYSDKSTSLLSIMFETNPLDEKADQRLRIESQPLEIVYDA
MTINSLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKVLDLKINLMASY
IIVPQKGFYDRTSNLLLLDLGSLKMKSKSRSDLSELKVGQSTIEDIMSRAYDSFDIQLSS
IQLLYSKHDENWQEARKLKNSSQHILQPLDVKVELSRAMVVTDARMPKFKLSGQLPLLSI
QISDQKLTSILELIDSIPKPESAPATSSPPKITEAAISPVLSAPHLSQGVFPVLDLHSFT
ESESEEEFYDALSSPVEDMPFFEASSGALKRASSTRRKKLRKQESLKNMTEFQLRFEVAK
VLIQLCRLTGNTETPVLQLDIVGLGTELKLRTFDMTANAFLREVCLLCPEYMDDNDKPVY
IITTLDNVEDDLLTLEYIKADINGPELKTAYQNVLQKMKVNFSSLDVHLHTEALLNAMNY
LNNLLPKQETKVAEEPVHEKTEEKKDVLKKLTSKKSKYEDVIDLNICADLSCLRIFIREK
KHRIAEIHIEGLDSQVIMKKAATEVNAKLKNIIIVDSDETALYKKALYITGKEVFNFRMI
SYVNATDGIAYTNMDVVDNRIYLTVGCIQVVFVNKFVSSILAFINNFQAAKEALTEATVQ
AAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAMSENVLVADLGLITVKNQFFIAKT
KTRYNLPPVVDSMTVKLSELKLYRSCYEQGSLQTEIQLLQPLNLEVAVERNLAAAWYNEV
PDIEISGRLKPMNLILSQEDITTILRTLNENIGGSSGASTSLPEPKDTTSHSSDMHSTSQ
HSAGVTVVTSAVVELHSPMKIKTTLKLDFRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAE
FKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKHGFEKKVMVDISY
KQGRDGTVLDVIVQEIYLCASMEFLLTVADIFLKANAESAAAQRSLKQSLPLKEQAPVQP
LSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVKEIQMKAC
PFLPEKRKGNVTTVLQPCDFFFEMKQSGTNPQTADLTIKSLTIKVSPIIINTVITITSAL
YQTAETTEEEISQIPPDLWNKKDIKNLKMWFLEEPNENEDTNPTAELVPTGESLKMNIES
VFITLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSRLELEVHYFNEMFGVWEPLLEP
LEVEKTDLFKPWILDIKMKKKAKKALVESDAEEENYKVPEYKTVINVSSKDQLNITLSKC
GLQMLSNLGTAFAEAASQTSDIFKKDRAPFVIMNSLGLPITVSPSDSFSVLNVEFGAKMF
HLRDGENLNMEFVRTKNESDQFTAMTTLSSKRFYIQICPHNHSTVEKIPLTKVGRCIYRV
RHEESGVERSIVCQIDTVEGSKMITIRSPIQIRNHFSIPLNIFEEGRCLGTASPENEFNI
PLSSYRSILSLQPLANENGVDGEYDICEGITFDEIMKNVDSLLQRKCQSVKSTNHSLIIN
IVPVKDMLTSSLCAEDQWDFPYVVHLWPSVLLRNLLPYQISYSIEGNGNKYDTLQEGCSA
QIHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPDISFTTFYCITELDKTELDIAVHVT
YTTGQMVMAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQL
MVTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSFNITRIVTFTPFFMISNRS
KYTLEVAEEGKEKWIPIVLQQCIPFWPENDANKLLVRVENSDLPPKKINFDKQENCLLLH
LDNKLGGITVDVNLTEHSTVITFSNYHDGAAPFLLINHTKEEIIEYGQSSLSELEDCLQP
NKAVLYTWADPAGSRKLKWKCGNRTEEITPKEDKMEILSLDCRKVVYLVSFFEGLQRIVL
ITEDENVFKLTYESVKAELAEQEIVLSLQDVGISLVNNYTKQEVSYIGITSSDVVWETKP
KKKSRWRPMSVKQTDKLEQEFKDYSELTPSENKIIELESNVLVCLTPNGMNMKIQQPNEI
PIRRNYLPALKVEYSSSAHQKSFRIQIYRIQIQNQIPGAIFPFVFYPIKPPKSITLDSAP
KPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFLYALVEFFTQTDVPSDQELEL
FKKDVESLQEELMSVSSMDTSQISLYEYFHISPIKLHLSFSLSTGGEDSNKEERKNELIP
LQSLNLLLKSIGATLTDVQDVVFKLAFFELSYHFCTTQQLQTAVVRHYSKQAIKQMYVLI
LGLDVLGNPFGFIRGLSEGVEAFFYEPYQGAIQGPEEFIEGMALGLKALVGGAVGGLAGA
ASRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRGGKGLVSGFVSGITGIVT
KPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKVADSSEDVISLRPP
RFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKLRYIAHAMVNSTDLLMVTKSGVLFVTK
GTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFKSPEDAKW
ILSKLEEVRENQPKL
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgagtcgctggtcgtggacgtcctgaaccgtttcctcggcgactacgtggtg
aacctggacagctcccagctgaagctgggcatctggggaggagccgtagcactgaagaat
cttgaaataaaagaaaatgcactgagtcagctggatgtgccatttaaagttaaagcagga
catattggtcaacttaacctacagattccatggcaaaacctttatactcaacctgttgag
gcagttcttgatggagtttatttgcttattgtgcccacagccagcataaaatatgatgct
gaaaaagaagccaggcagctcttggaagcaagacaaagggaattgcaaaggatagaggaa
gcaaagcagaaaatagctgaccaagataaagtaaaagaagagaaacaagacacttttgta
gaaaaactagtcactcaggtcatcaaaaatcttcaggtgaaaatttccaacatccatatt
cgctatgaagatgatatcacaaatcgaaataaccccttgtcatttgggatttcacttcag
aatctaagtttgcagacctcagataagaattggaatccatgtttacacgatgaaactgcc
aagttgttctacaagcttgtacgactggataacctttttgcttactggaatgtgaaatct
gagatgttctaccatggtggttgtgacgaatcgttggttaacttaaaacagggagttgcc
agccacaatgtgattccagaaggttatgattttgtattccgcccaatttcagctagagcc
aaactccttatgaatcctcgatctgatgttgacttttcatcaccgaaaatggatttagat
gtaaatttacaggatataactgttgaattcaataagccacagtacttcagtgttatggag
cttcttgagtcgattgatatgatgactcgaaacttgccatataggaaatacagacctgat
gttccattgcacaacaatgccaagacatggtggaaatatgttatttatggcatccttgaa
gtaaatgttcaacctaagctccaaatgtggtcatgggaacatattcggcaccataggaga
caagtgaagagctataaagagatgtataaaacaaagataacatcaaaaaaacctaatgaa
gaaatcttaaaattgttggaggaattcgaaaaggccttggatatttttaacatcactcta
gcaaggcaacaagcagaagttgaggcaactaaggctggattaaaaatctacagaccagga
gtaaaacaagatgatgaaaattctggtggctggtttagttggatatggagctggtcaggt
gaaaaaaaggatgaacaaaaacaagaagtaaagggttcaagtcttgaagagctgatgaca
cgtgaagagaaggctaaactttatgcagcaattggatatagtgaaacagctgtggatcca
actcttccaaaatcatatgaagccatgaagttctctgtgaagttattaagcatgtctata
tcaataagagaaaacaagcaatctccggagctggtagaatttgcattagctggcttgagt
acagtatttacccaacgaccaggtgcacaagcaataagatttgaaacaaaaattacctca
cttgaagttacaggcatgtcccgagaaaagtgtacaccctgtctcctatcttctcgaacg
gtctattcagacaaaagtacctcactcttaagcataatgtttgagactaatcctttggat
gagaaagcagatcagaggcttagaatagaatcacagccactggaaatagtatatgatgca
atgacaataaatagcttagtggatttcttcaggcctccaaaagatgtacatttagagcaa
ttgacatcagcaactctgatgaagcttgaagaattccgtgaaaaaacatcaacaggtttg
ttgtatgttattgaaacccagaaagttcttgacctcaaaattaacctcatggcttcatat
atcattgttccacaaaaaggattctatgaccgtacgtcaaatttactacttctggatctt
ggtagtcttaagatgaaaagcaaaagtcgttctgatttatcagaactcaaagtaggacaa
agcactattgaagatataatgtcaagagcttatgacagttttgatatccagctcagcagt
atacagttactgtacagcaaacatgatgagaactggcaagaggctcggaagctgaaaaat
tcatctcaacatatcttgcagcccttggatgtaaaagtggaattgagcagggctatggtt
gttacagatgcaagaatgcccaagttcaaactgtccggacagctgcctttactttctatc
caaatatcagaccagaagctgacaagtatcttggagctaattgatagtattcctaagcca
gaaagtgctcctgctaccagttctcctccaaaaataactgaggctgcaatatcccctgtg
ctctcagcaccacatttatcacaaggtgtgtttcctgttttggatcttcattcatttact
gagtcagaatcagaagaagaattttatgatgctctaagcagtcctgtggaagacatgcca
ttttttgaagcctcatctggtgccctcaagcgagctagcagtacaaggcgaaaaaaacta
cgtaaacaagaatctttgaaaaatatgacagaattccagttaaggtttgaagtagctaag
gtcttaattcaattatgccgtcttactggtaacactgagacacctgtgctgcagctggat
attgtagggttaggcactgaacttaaattaagaacatttgacatgactgcaaatgctttc
cttcgtgaagtttgtctgctgtgcccagagtatatggatgataatgacaagccagtttac
ataattactactttggataatgtagaagatgatcttctcactctggagtacataaaggct
gatattaatggaccggaactgaaaactgcctatcagaatgttctacagaaaatgaaggtg
aacttttcatctttagatgttcatttgcatactgaagctctgctgaatgctatgaactac
ctgaacaatcttctacccaaacaagaaactaaagttgcagaagaaccagtccatgaaaaa
acagaggagaagaaggatgttcttaagaaactcacatcaaaaaaatcgaagtatgaagat
gtcatcgacctcaatatctgtgcagatttatcatgtttacgtatctttattagagagaaa
aaacatagaatagctgaaattcacattgaaggtctggatagccaagtgatcatgaagaaa
gcagcaacagaagtgaatgcaaaattaaagaacatcattattgtggattctgatgagaca
gcattgtataaaaaggctctttacatcacaggaaaagaagtcttcaactttagaatgata
tcatatgtgaatgctacagatggcattgcatatacaaatatggatgttgttgacaatcgt
atttacctaactgttgggtgtattcaagtagtttttgtcaacaagtttgtttcatctatt
ttggcttttataaataactttcaagctgccaaggaagctcttactgaggcaactgttcaa
gcagcagagaaagcagctacaggtgtaaaagagctagcagagcgtagttcccgtttggca
ctagatatcaatattaaagcacctgttgttatagttccacagtcagcaatgtctgagaat
gtcctggtggctgatcttggtttaatcacggtgaagaaccaattctttatcgctaaaaca
aaaacacggtataatctcccgcctgttgttgactctatgacggtgaaattgagtgaacta
aagttatacagatcatgctatgagcagggttcattgcaaactgaaatacagttgctgcag
ccactcaatctggaagtagctgttgaacggaatttagctgctgcatggtataatgaagtt
cctgatattgaaatatctggccgcctcaagcctatgaatctaattctcagtcaggaagat
attaccacaatattgaggacactaaatgaaaatataggaggaagctctggtgcatcaaca
tctttaccagaaccaaaagatacgactagccattctagtgatatgcatagtacttcacag
cactctgcaggtgtaactgttgtgacatcggctgtggtggaattgcattcacctatgaaa
ataaaaacaacactaaagctggacttcagattcgactctctgactttagtattgtatagt
ccaaattcaaaacaggttacaaatttggatcagagagatgaccttttgaagcttgcagag
tttaagttagttttgatgtcagctgctgtcaaaatgttatcagatggttcaatgaatgct
tcagtcaagctggcaaactgtactttagatgataaaagacagtcaatccagaaggctaca
ccaaggatggtggaaatgaaacatggatttgaaaaaaaagttatggtggatatcagctat
aagcaggggagagatggcactgttcttgatgtgattgtccaagagatatacctttgtgca
agcatggagtttctacttactgtagcagatatattcctaaaggctaatgcagaaagtgct
gctgcacagagaagtctgaaacagtcactacctttaaaggagcaagcacctgtgcagcct
ctatctacaatggaaatgaacattgttgttaaaaatccagagattgtgtttgtggctgat
ttaacaagaagtgatgctcctgcattggtggttacaacacagtgtgaggtcttcattaaa
aatagccctgaaaggtacagcatgacagctgctgttaaagagatacaaatgaaagcatgc
ccatttcttccagaaaaaaggaaagggaatgttactacggtattacagccttgtgacttc
ttctttgaaatgaaacagtcaggtactaatccacagacagctgatctaacgattaaatct
ctaacaataaaagtttcaccaataatcataaatacagtaattactattacatcagccctt
tatcaaactgcagaaacaacagaagaagagattagtcaaattcctccagacttgtggaat
aagaaagatataaaaaatctaaaaatgtggtttcttgaagagccaaatgaaaatgaagat
acaaatccaactgctgaactggttccaaccggagagtcgttgaaaatgaatatagaatct
gtttttataacacttgaagctggggttgggcaccgaactgtaccaatgcttttagccaag
tcctcatttcttggagaagtcaaaaactggagtactctaatcaacctacgttctcgtctt
gagctagaggtacactattttaacgagatgtttggggtgtgggaacctttgcttgaacca
ctagaagttgagaagactgatttattcaaaccatggattcttgatatcaagatgaagaag
aaagctaaaaaagcattggttgaatcagatgcagaagaagaaaactacaaagttccagaa
tataaaacagtaataaatgtttcctcaaaagaccagctgaacattacactatccaaatgt
gggctgcaaatgttgagtaacttgggcacggcatttgctgaagccgccagtcaaacttca
gacatcttcaaaaaagaccgagcaccatttgtaataatgaattctttaggacttcctatc
actgtctcacctagtgattcctttagtgtccttaatgttgaatttggagcaaaaatgttt
catttaagagatggagagaatttaaatatggaatttgtcagaactaaaaatgagagtgac
cagttcacagcaatgacaactctgagtagcaagaggttttacattcagatctgtccacat
aaccattccactgtggaaaagattccattgacaaaagtgggtcgatgtatttacagagtg
agacatgaggaatcaggtgttgaaaggtccattgtctgccaaattgatactgttgaagga
agcaagatgataactatacgttctcctattcagataaggaatcatttttcaatcccatta
aatatttttgaggaaggaagatgtttagggactgcttcaccagaaaatgaattcaacata
ccattgtcctcttacagatccatactgagtttgcaaccgctagccaatgaaaatggagtg
gatggagaatatgatatatgtgaaggaattacatttgatgaaattatgaaaaatgttgac
agtttattacaaaggaaatgccagtctgtgaagtcaactaaccactcacttatcatcaat
attgttcctgtaaaagacatgttgacatcttcattatgtgcagaagatcaatgggatttt
ccatatgttgttcatttatggccttctgttcttctccgcaatcttcttccttatcaaata
agttattctatagagggaaatgggaacaaatatgacactctacaagaaggatgttcagcc
cagattcataatgcagtcttggaccaaacaaaactagatttacagttgcttaactatctt
gatcaaaattggaaaagtgagtaccatataaaaagtaatctaccagatatcagcttcacg
acgttttactgcatcacagagctggataagactgaactggatattgctgtccatgtgacc
tacacaactgggcagatggttatggcaattcacagtccgtactggatggtaaataaaacc
ggtcgaatgttgcaatacaaagctgatggtattcaccgcaagcatcctccggattacaaa
aagccgctccttttttcattccagcccaaaaacttcctacaaaataacaaggtgcaactt
atggtaactgacagtgaactctctgatcagttttcactggacactgttggaagtcatggt
tctgtgaaatgcaagagtcataaaaaggaatatcaggtcggtgtcaccataaacaacagc
agttttaatattactagaattgtaactttcactccattctttatgatctcaaacagaagc
aaatacactttggaagtagctgaagaaggcaaggaaaagtggattcctattgttttgcaa
cagtgcattcccttttggcctgaaaatgatgctaacaaactgcttgttagagttgaaaat
tctgatctccccccaaagaagataaattttgataagcaagaaaactgtctgctactgcat
ttggacaacaagcttggaggaattacagtggatgttaacctgactgaacattctacagtg
attaccttttctaattaccatgatggtgcagctccattcctgttgataaaccatactaaa
gaggaaattattgagtatgggcaaagctccctcagtgaattggaagactgtcttcagcca
aataaggcagtactgtatacttgggcagacccagcaggatctagaaaattgaaatggaaa
tgtggaaatagaactgaagaaattacccccaaagaggacaaaatggaaatactcagcctg
gattgtagaaaagtggtctatttagtgtcattttttgaaggtttgcagcgtattgtcctg
atcactgaagatgagaatgtctttaaattgacctatgaaagtgtaaaagcagaactagca
gaacaagaaattgttctgtctttgcaagatgttggaatttcgttggttaataattataca
aagcaagaggtgtcctacattggaattacaagttctgatgtggtttgggagacaaaaccc
aagaagaagtcaagatggagaccaatgagtgttaagcagactgataaattagaacaagaa
ttcaaagattacagtgagctaactccttcagaaaataagattattgagttggaatcaaat
gttttggtatgtttaactcctaatggaatgaacatgaaaattcaacaaccaaatgagatt
cctatcagaaggaattatctgccagctttaaaagtagaatacagttcatctgcacatcag
aagtctttcagaattcaaatttacaggatacagatacaaaaccagattcctggagccata
tttccctttgtgttctatcctattaaacctccaaagtccatcaccttggattcagcacca
aaaccatttactgatgtcagtattgtcatgagaactgcaggacattcacaaatatctcat
attaagtattttaaggtcctgattcaagagatggatctcagattagatcttggcttcctg
tatgcactggttgaattctttacacagactgatgtgccgagtgaccaagagctagaactt
ttcaaaaaggatgttgaatctcttcaagaagaactgatgagtgtgtcatcaatggatacg
tcacaaatcagcttgtatgaatactttcatatctctccaattaagttacacttaagcttt
tcactcagtacgggtggagaagatagtaacaaagaagaaagaaagaatgaattgatacca
cttcagtccttgaatctcctgctgaagagtataggggccaccctcacagacgtacaagat
gttgtctttaagttggcattctttgaactcagctatcacttctgtactacacaacagctc
caaacagccgttgtaaggcattattcaaaacaggctattaagcagatgtatgttcttatt
cttggccttgatgtcttgggtaatccatttggattcataagaggcttatctgaaggagta
gaagcattcttctatgaaccttaccagggagccatccaaggtcctgaagaatttatagaa
ggaatggcactaggacttaaagcactagtagggggagctgttggtggattagctggtgct
gcatcgagaatcactggtgctatggcaaaaggagtagctgcgataactatggatgaggat
taccagcagaagaggagagaagccatgaataaacagcccactggtctgagagagggtatc
actcgtggtggaaaaggattagtttctggttttgtcagtggcataacaggaatagttaca
aaaccaataagaggagctcagaaagaaggagcagctggttttttcaaaggtgttggaaaa
ggcttagtgggagcagtagctaggcctactggaggaatcattgacatggcaagcagcaca
tttcaggggattaaaaaagttgcagattcatcagaagatgtgataagcctgcgtccacct
cgcttctttggtgaagatggagttattagaccgtacaggttaagagatggaactggaagt
caaatgttacagaaaattgaaaacggaagatttgcaaaactcagatatattgcacatgct
atggtcaacagtacagacctgttaatggtaacaaaaagtggtgtgttatttgtgacaaaa
gggacatttggacagctgacatgtgaatggcagtacacttacgatgaatttaccaaagaa
ccattcatcgttgatggcagaagattacgcattgaagccaaggagcgagttaagtctgtg
ttccatgccaaagaatttggaaaaattattaattttaaaagtccagaggatgctaagtgg
atcctttctaaactggaagaagtgagagagaatcagccaaaattgtaa
DBGET
integrated database retrieval system
