Mycteria americana (wood stork): 142421964
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Entry
142421964 CDS
T11228
Symbol
DIS3
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mame Mycteria americana (wood stork)
Pathway
mame03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mame00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
142421964 (DIS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mame03019
]
142421964 (DIS3)
Messenger RNA biogenesis [BR:
mame03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
142421964 (DIS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Toxin_R_bind_C
Terminase_7
Motif
Other DBs
NCBI-GeneID:
142421964
NCBI-ProteinID:
XP_075383362
LinkDB
All DBs
Position
1:complement(179689086..179713655)
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AA seq
961 aa
AA seq
DB search
MLTSRTFLKRTRAGAVVKVVREHYLREDIPCGAAACRLCAPRPAGPGLGLEAQPSGAASS
LCPGPHYLLPDTNLLLHQIDILEDPVIKNVIVLQTVLQEVRNRSAPVYKRIRDVIGNPEK
HFYSFTNEHHRETYIEQEQGETSNDRNDRAIRVAVKWYNEHLKKIEDEEKIQVIFLTNDR
TNKEKALEEGITAYTCEEYIKSLIANPDLVDRLACVSDEGEIESGKIIFPEHIPLSKLQQ
GIKSGIYLQGTYRASRDNYLEATVWVHGDAEENREIIIQGLKHLNRAVHEDIVAVELLAR
DEWVAPSSVVLQDDGQNEDDIENEEEKENILKTSVNKDMLRPTGKVVGIIKRNWRPFCGM
LSKSQIKEARRHLFTPADRRIPRIRIETRQAETLEGQRIVVAIDGWPRNSRYPNGHFVKN
LGSAGDKETETEVLLLEHDVPHQPFSQGVLSFLPKMPWSITEQDMKCREDLRHLYVCSVD
PPGCTDIDDALHCREVENGNIEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEKRIDM
VPELLSSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQMRIDS
ATMNDDITTSLRGLNKLAKILKKKRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKET
NSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKAAKSQNLEIKTDSAK
ALAESLDKAESPAFPYLNTLLRILTTRCMMQAVYFCSGMDNDFRHYGLASPIYTHFTSPI
RRYADIIVHRLLAVAIGADSTYPELTDKHKLADMCKNLNYRHKMAQYAQRASVAFHTQLF
FKSKGVVNEDAYILFVRKNAVVVLIPKYGLEGTVFFEEKGKPTPRLDYNNEVPSLTVEDT
TLRVFDKVKVNIMLDASNIQHQKIRMVLVEPKIPGNDVPATLSTEISSKNEPEKKKKKIQ
K
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctcgcggacgttcctgaagcgcacgcgggcgggcgccgtggtgaaggtggtg
cgcgagcactacctgcgcgaggacatcccctgcggcgccgccgcctgccgcctctgcgcc
ccccgccccgccgggcccggcctcggcctggaggcgcagcccagcggcgccgccagcagc
ctctgccccgggccgcactacctcctgcccgacaccaacctcctccttcaccagattgat
atacttgaagatcctgttattaagaatgtcattgtgctacagacagtcttacaagaagtt
aggaatcggagtgcaccagtgtacaagcgaattagggacgtgattggaaaccctgaaaaa
catttctattctttcaccaatgaacatcatcgagaaacatacatagagcaagagcaagga
gaaacttctaatgaccgcaatgacagagccattcgggtagcagtaaaatggtacaatgaa
cacttgaagaaaatagaggatgaggagaagatccaagttatctttttaacaaatgacaga
actaataaagagaaagctctagaggaagggataactgcttatacatgtgaggagtatata
aaaagcttgatagctaatcctgatcttgtagatcgtcttgcttgtgtatctgacgaaggg
gaaatagaaagtggaaaaataattttcccagaacatattcctcttagcaaactgcagcaa
ggaataaaatctggtatttacctccaaggaacttacagggcaagcagagataattatctt
gaagctactgtttgggttcatggagatgctgaagaaaacagagagataattatacaggga
ctgaaacatctaaaccgagcagttcatgaagatattgtagctgtggagttgttggcaaga
gatgaatgggtggcaccatcctcagtggtcttgcaggatgatggccagaatgaagatgac
attgaaaatgaagaggagaaagaaaacatcctgaagacttctgtgaacaaggacatgctg
agacctacaggaaaagtagtgggcattataaaacgaaactggcgaccattttgtggcatg
ctttccaaatcacagatcaaagaggcaaggcgccatttgtttacaccagctgatcgcaga
attcctcgcattcgaatagaaacaagacaagcagagacattggaaggacaaagaatagtt
gttgctattgacggttggcccaggaattccaggtatcctaatggtcattttgtaaagaac
ttgggaagtgctggagataaagagactgagacagaagttcttttgcttgaacatgatgtc
cctcatcagcctttttcccagggtgtccttagtttcttaccaaagatgccatggagcatt
acagaacaggatatgaaatgcagggaggacttaaggcatctgtatgtttgtagtgttgat
cctcctggctgtacagatattgatgatgcattacattgtagagaagtagaaaatggaaat
atagaggttggtgtacatattgcagacgtcagtcattttattcgcccgggaaatgctttg
gatgaggagtcggcaaaaagaggaacaacagtatatctgtgtgaaaaaaggattgatatg
gttccagagttactgagttccaatttatgctccctgagatctaatgtggacaggcttgca
ttttcatgtatatgggagatgaaccataaggctgaaattctgaaaaccagatttacgaag
agtattattaattccaaggcttctcttacatatgccgaagcacagatgagaattgattca
gcaactatgaatgatgatattactaccagcctacgtggactaaacaaattagcaaaaatt
ctgaagaagaaaagaattgataatggagccttgacactttcctcaccagaagttcgtttc
cacatggacagtgaaactcatgatcctattgatctgcagactaaggagctcaaagaaacc
aattccatggttgaagagttcatgttgcttgccaatgtctctgtagcacaaaaaatttac
gatgagttcccagagtttgccttgctccggaaacatcctgctcctcccccatcaaattat
gacatccttgtgaaggcagcaaagtcccagaatttggaaattaagacagattcagcaaag
gctttagctgaatcgttagacaaagctgagtctcctgcattcccctatctgaatacactg
ttgcgaattttgaccactcgctgcatgatgcaagctgtttatttctgctctggaatggat
aatgattttcgtcactatggtttagcctcgcctatttatacccactttacgtcacccatt
agaaggtatgctgacattatagtacatcggcttttggcagtggccataggagcagacagt
acttacccagaacttacagataaacataagctagcagatatgtgtaaaaatctcaattat
cgacataaaatggctcaatatgcacaaagagcgtctgttgcattccatacacagctgttc
ttcaaaagcaaaggagtagtgaatgaagatgcatatatattatttgtaagaaaaaatgca
gttgtggttctgattcccaagtatgggttagaaggaacagtcttctttgaagaaaaaggt
aaaccaacaccaagactggattacaacaatgaggtaccatcacttactgtggaagacaca
acgttacgtgtgtttgataaagttaaagtgaacattatgttagatgcttccaacattcaa
catcagaaaattcggatggtgttggtagaaccaaagataccaggaaatgatgtgcctgca
actctgtctacagagataagcagcaagaatgaaccagagaaaaagaaaaagaagatacaa
aaatag
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