Marinobacter sp. MMG032: ABNF92_12120
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Entry
ABNF92_12120 CDS
T10637
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mamm Marinobacter sp. MMG032
Pathway
mamm03420
Nucleotide excision repair
mamm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABNF92_12120 (uvrD)
03430 Mismatch repair
ABNF92_12120 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamm03400
]
ABNF92_12120 (uvrD)
Enzymes [BR:
mamm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABNF92_12120 (uvrD)
DNA repair and recombination proteins [BR:
mamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABNF92_12120 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ABNF92_12120 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XBQ18199
UniProt:
A0AAU7MIJ7
LinkDB
All DBs
Position
2652248..2654413
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AA seq
721 aa
AA seq
DB search
MDVSHIIDPLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMTVDRVPPTGILAV
TFTNKAAKEMRYRIEQMMQIPARGLWFGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RLIKRVMRENQIDESKWPPKQAQWFINSQKDEGLRADHIQENPGDQFLSIMLKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLAHYQGRFQHILVDEFQDTNTIQYAWLQVLASN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNSRLVRLEQNYRSTQMILKAANAVIAN
NQGRLGKELWTDGPEGEPISLYAAFNEQDEANYIADSISAWVQDGNLRSECAILYRSNAQ
SRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVQYRRDDAAFERVVNVPPRGIG
AKSLAELREYATEQNISLWESAERLLEAGQVKGRAKTGLQSFIAIIEKLSGMVGDATLHG
LMKQTIEDSGLKDYHASEKGEKGQARVENLEELVNALSDYEVEDGVDPLAEFIAQAALDA
GESQAEAHEDSVQLMTLHSAKGLEFPMVFLAGVEEGLFPHGMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFNALSRFVREIPGDCLQEVRLRNTVTRPAMVERPNES
LFAQDSARQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctcccacatcatcgatcctttgaacgatgcccagcgcgaagctgttaccgca
cagaacgatcaccttttggttctggccggcgcaggcagcggcaaaacccgtgttctggtg
caccggatcgcctggttgatgactgtggatcgggttccgcccactggcatcctggcggtg
accttcaccaacaaggccgccaaggaaatgcgttatcgcatcgagcagatgatgcagatt
ccggcccgtggactctggttcggcacgtttcatggcatcgctcaccgcctactgcgttcg
cactggaaagacgccggactgcccgagaacttccaggtgctggacagcgacgaccagctg
cggctgatcaaacgggtgatgcgcgaaaaccagatcgacgagagcaagtggccgccgaag
caggcccagtggtttatcaacagccagaaggacgaggggctgcgggcggatcatatccag
gagaatccgggcgatcagtttctgtcgatcatgctgaagatttaccgccagtacgagaag
ctctgccagcagggtggtctggtggattttggcgagttgctgctgcgctcccacgagctc
tggctgcaccggccagagctgttggcccactaccagggccggttccagcacatcctggtg
gacgagttccaggacaccaacaccattcaatacgcctggctgcaggtgctggccagcaac
cgggtgccgctgacggtggtgggtgacgacgatcagtccatctacggctggcggggcgcc
aagatcgagaacatccagcagtaccagcgggatttccccaattcgcggctggttcgcctg
gaacagaactaccgctccacccagatgattctgaaggcggccaacgctgtgatcgccaat
aaccagggtcggcttggcaaggagctctggaccgacggcccggaaggcgagccgatcagt
ctgtacgcggcgttcaacgaacaggatgaagcgaactacatcgccgacagcatttccgcc
tgggttcaggacggcaatcttcgcagtgagtgcgcgattctataccgctccaatgcccag
tcccgtgtgcttgaagaggcgctgatgcgccaggggattccctatcgggtctacggcggc
ctgcgcttctatgatcgccaggaaatacgcaacgccctggcgtacctgcggctggttcag
taccgccgcgacgacgcggcgtttgagcgggtggtgaacgtgccgccccggggcattggc
gccaagagcctggcggagctgcgggaatacgccactgagcaaaacatctcgttgtgggaa
tccgccgagcgcctgctggaagccgggcaggtgaaaggccgggccaaaaccgggctgcag
tcgtttattgcgattatcgaaaaactgtccggcatggtgggagatgcgaccctgcatggg
ttgatgaagcagaccattgaggacagcgggttgaaggattaccacgccagcgaaaagggc
gagaaaggtcaggcgcgggtggagaacctggaggaactggtcaacgctctgtctgactat
gaggtggaagatggcgtcgatccgctggcggaattcatcgcccaggccgcgctggacgcc
ggcgaatcccaggccgaagcccatgaggacagcgtgcagctgatgaccctccattcagcc
aaaggcctggagtttccgatggtgttcctggccggtgtggaggagggtttgttccctcac
ggcatgtccctggaagagccgggtcgcatggaagaggagcgtcgtctggcctacgtgggc
attacgcgggccatgaaaaagctggtgcttacttacgccgaatcccgccggttgtacggg
caggagaagtttaacgctctgtcccggtttgtgcgggaaattccgggcgattgtttgcag
gaagtgcggctgcgaaatactgtgactcggccggcgatggttgagcgtcccaacgaaagc
ctgtttgcccaggattcggcccggcagtcaggcttcagcctggggcagagggttcgccat
cccaagtttggtgaaggtatcgtgatgaattcagagggtaccgggcaccatactcgggtg
caggtgaactttgatgagggcgcgaagtggctggttttggcttatgcgcctttggaggcc
tgctga
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