Mesorhizobium amorphae: A6B35_03835
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Entry
A6B35_03835 CDS
T04446
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mamo
Mesorhizobium amorphae
Pathway
mamo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6B35_03835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamo03021
]
A6B35_03835
03019 Messenger RNA biogenesis [BR:
mamo03019
]
A6B35_03835
Transcription machinery [BR:
mamo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A6B35_03835
Messenger RNA biogenesis [BR:
mamo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A6B35_03835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
S1CSD-TOTE-2
AAA_25
AAA_22
DnaB_C
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ANT49126
UniProt:
G6YHT1
LinkDB
All DBs
Position
complement(814190..815446)
Genome browser
AA seq
418 aa
AA seq
DB search
MKLTEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDIEIIGDGVVEVLQD
GFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTIN
FDDPEKIRHKIHFDNLTPLYPTKRLKMEIDNPTSKDISPRVIDLVAPIGKGQRALINAQP
RTGKTVLMQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAVRHV
QVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIQLDRKVADKRIYPAMDI
LKSGTRKEDLLIPRADLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMNT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgagttcaagaacaagaaaccgccagagctgatcgcttatgccgaatcg
ctcgaggtcgagaacgccagcgtcatgcgcaagcaggagctgatgttcgcgatcctgaag
aagctggccgcacaggacatcgagatcatcggcgatggcgtggtcgaggtgctgcaggac
ggtttcggcttcctgcgctcggccaatgccaactatctgcccggtccggacgacatctat
atttcgccgtcgcagatccggcgcttttcgctgaagaccggcgataccgtcgaagggccg
atccgcagcccgaaagagggcgagcgctatttcgcgctgctcaaggtcaacaccatcaat
ttcgacgatcccgaaaagatccgtcacaagatccacttcgacaatctgacgccgctctat
ccgaccaagcggctgaagatggagatcgacaatccgaccagcaaggacatctcgccccgc
gtgatcgacctggtggcgccgatcggcaagggacagcgcgcgttgatcaacgcgcagccg
cgtaccggcaagacggttctgatgcagaacatcgcccactcgatcactgccaaccatccg
gaatgctatctgatcgtgcttctgatcgacgagcggccggaggaagtgaccgacatgcag
cgctcggtgaagggcgaggtaatctcctcgaccttcgatgagccggcggtgcgccatgtt
caggtcgccgaaatggtcatcgaaaaggccaagcgcctggtcgagcacggtcgcgacgtc
gtgatcctgctcgattccatcacccgtctcggccgcgcctacaacactgtggtgccgtcc
tccggcaaggtgctgaccggcggtgtcgacgccaatgcgctgcagcggccgaagcgcttc
tttggcgcggcccgcaacatcgaggaaggcggctcgctgaccatcatcgcgaccgcgctg
atcgataccggcagccgcatggacgaggtcatcttcgaagaattcaagggcaccggcaac
tgcgaaatccagctcgaccgtaaggtggccgacaagcgcatctatccggccatggacatc
ctgaagtccggcacccgcaaggaagacctgctgatcccgcgcgccgacctgcagaagatc
ttcgtgctgcgccgcatcctggcaccgatgggaaccaccgacgcgatcgaattcctcatc
gacaagctcaagcagaccaagaccaatgcggatttcttcgattcgatgaatacgtga
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