Mesorhizobium amorphae: A6B35_16950
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Entry
A6B35_16950 CDS
T04446
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mamo
Mesorhizobium amorphae
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamo03016
]
A6B35_16950
Enzymes [BR:
mamo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6B35_16950
Transfer RNA biogenesis [BR:
mamo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6B35_16950
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ANT51466
UniProt:
G6YJJ0
LinkDB
All DBs
Position
complement(3628835..3629986)
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AA seq
383 aa
AA seq
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MHVITTQSELENVVAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSPDI
DLKPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLSAELVRENRAHWLNE
EMEVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAGLGRLRTTPKGWERSATATALLGAVNTALALPKEAMPKLPKSFQPP
EGSNAASELLKVLLRIVAEKEGVASKVLASSDDIDRIAAEGEAADVPALQGWRRAVFGEA
ALKLVRGEIGIKFDKRKIALFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacacaaagtgaactcgagaacgttgtcgccgcgttcgaaaagtcg
gatttcgtcaccgtcgacaccgaattcatccgcgaaacgaccttctggccgattctctgc
ctgatccagatggcggcgcccggcgtgacggcgctgatcgatccgttgtcgccggacatc
gacctgaaaccattcttccggctgatggccaacgaagcggtggtcaaggtcttccacgcg
gcgcggcaggacatcgaaatcatcgtccatctcggcgatctcgtgccgcatccggtgttc
gacacacaggtggcggcgatggtctgcggcttcggcgacagcgtctcctacgaccagctg
gtgcagcgcatcaccggcgcccggctcgacaagtcctctcgcttcaccgactggcgccat
cgtcccttgtccgacaagcagctcgactacgcgctggccgacgtcacccatctgatcgag
gtctaccagcacctcagcgccgaactggtgcgggaaaaccgcgcccattggctgaacgag
gaaatggaggtgctgacctcgcgcgagacctacgatccgcatcccgaggacgcctggaag
cggctgaagatgcggctgcgcaagccgcaggagctggcgatcgtacaggcggtggcggca
tggcgcgagcgcgaggcgcgcgaacgcgacgtgccgcgcggccgggtgctgaaggacgac
gcgatctacgaggtcgcccagcaggcgccgcgcgatgcggcgggacttggccgcctgcgc
accacgccgaaaggctgggaacgctcggcgacggcaaccgccctgctcggcgcggtcaac
accgcgctggcgctgccgaaggaagcgatgcccaagctgccgaagagtttccagccgccg
gaaggctcgaatgccgcgtcggaattgctgaaagtgcttttgcgcatcgtcgccgaaaag
gaaggcgtggcgtcgaaggtgctggcttccagcgacgacatcgaccgcatcgccgccgag
ggcgaggccgccgacgtgccggccctgcagggctggcggcgcgcggtgttcggagaagcg
gcgctcaagctggtgcgcggcgagatcggcatcaagttcgacaagcgcaagatcgcgctg
ttcgatctgtag
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