Mesorhizobium amorphae: A6B35_19625
Help
Entry
A6B35_19625 CDS
T04446
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mamo
Mesorhizobium amorphae
Pathway
mamo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6B35_19625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamo03019
]
A6B35_19625
Enzymes [BR:
mamo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6B35_19625
Messenger RNA biogenesis [BR:
mamo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6B35_19625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ANT51944
UniProt:
G6YI42
LinkDB
All DBs
Position
complement(4179735..4181183)
Genome browser
AA seq
482 aa
AA seq
DB search
MTNENTFAGNTTSAGNTGELSGFAALGISGALLKATHAAGFTDPKPIQVQAIPPQLEGRD
IFGIAQTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKILAKG
AHVSTALVLGGVSRFSQVKKVAPGVDILIATPGRLTDLVREGDLILSDTKWLVLDEGDRM
LDMGFINDVKRIAKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEVSPQSTAAAEIV
QGVVFARTKQKRQVLSKMLADEAMRSVIIFSRTKHGADRVTKDLERDGFKAAVIHGNKSQ
NARQKALNDFRDGSVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGM
DGIAITLCDPSENSKLRQVERIIRSKLPIVADHLGSPDPQRNPAEKNERFEPAKDRADHN
GRRDGRRPGGNNGFGKKRFGDKPAGDRPFAAKPQGERPEGRKPFKGNNKRRFGGKRPATR
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaacgaaaacacttttgccggtaacactacatcggccggcaacactggggaactc
tcgggtttcgcagcacttggaatttcgggcgcgctgctcaaggcgacccatgcggcgggc
ttcaccgatccgaagccgatccaggtccaggcaatcccgccacagctggaaggccgtgac
attttcggcatcgcccagaccggctcgggcaagacggcggccttcgcgctgccgatcctg
tcgaagatcatcgcgctcggcaccaagcggcgcgccaagacgacccgcgcgctgattctg
gcgccgacccgcgaacttgccgtgcagatcgaggacaccatcaagatcctcgccaagggt
gcgcatgtttcgaccgcgctggtgctcggcggcgtctcccgcttcagccaggtgaagaag
gttgctcccggcgtcgacatcctgatcgccacgcccggccgtctgaccgacctggtgcgc
gagggcgacctcattttgtccgacaccaaatggctggtgctcgacgaaggcgaccgcatg
ctcgacatgggtttcatcaacgacgtcaagcgcatcgccaaggcgaccgcgccggatcgc
cagacggcgctgttttcggccaccatgccggatgaaatcgccgagctggccaagggcctg
ttgaagaacccggttcgcatcgaggtctcgccgcagagcaccgcggcggccgagatcgtg
cagggcgtcgtctttgcccgcaccaagcagaagcggcaggtgctgtccaagatgctcgcc
gacgaggcgatgaggtccgtcatcatcttttcgcgcaccaaacatggcgccgaccgggtg
accaaggatctcgagcgcgatggcttcaaggccgccgtcatccatggcaacaagtcgcag
aacgcccgccagaaggcgctcaacgatttccgcgacggctcggtgcgcattctggtggcg
accgatatcgcggcgcgcggcatcgacgtgcccggcatcagccatgtggtgaacttcgac
ctgcctgatgaagcggaaagctatgtccaccgcatcggccgcaccggccgcaacggcatg
gacggcattgccatcacgctttgcgatccgtccgagaacagcaagctgcgccaggtcgag
cgcatcatccgcagcaagctgccgatcgttgccgaccatctcggcagccccgatccgcag
cgcaatcctgctgaaaagaacgagcgcttcgagccggccaaggatcgcgccgaccacaat
ggccgtcgcgatggccggcggccgggcggcaacaacggtttcggcaagaagcggttcggc
gacaagccggccggcgatcgtccgttcgcggccaagccgcaaggcgagcgtccggagggc
cgcaagccgttcaagggcaacaacaagcgccgtttcggcggcaagcggccggctacccgc
gctgcctga
DBGET
integrated database retrieval system
